RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 BMPERQ8N8U9 685 aa3.94□□□□□ -1.78
PTPRK-215ENST00000498284 DDHD1Q8NEL9 900 aa3.94□□□□□ -1.78
PTPRK-215ENST00000498284 SUSD6Q92537 303 aa3.94□□□□□ -1.78
PTPRK-215ENST00000498284 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
PTPRK-215ENST00000498284 GTPBP2Q9BX10 602 aaKnown RBP3.94□□□□□ -1.78
PTPRK-215ENST00000498284 CPVLQ9H3G5 476 aa3.94□□□□□ -1.78
PTPRK-215ENST00000498284 TRPV4Q9HBA0 871 aa3.94□□□□□ -1.78
PTPRK-215ENST00000498284 POLLQ9UGP5 575 aa3.94□□□□□ -1.78
PTPRK-215ENST00000498284 ERRFI1Q9UJM3 462 aaPredicted RBP3.94□□□□□ -1.78
PTPRK-215ENST00000498284 KCNK7Q9Y2U2 307 aa3.94□□□□□ -1.78
PTPRK-215ENST00000498284 MYO15BQ96JP2 1530 aa3.94□□□□□ -1.78
PTPRK-215ENST00000498284 CCER2I3L3R5 266 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 SLU7O95391 586 aaKnown RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 APOHP02749 345 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 CSN3P07498 182 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 IRF2P14316 349 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 CDC25CP30307 473 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 NKX2-1P43699 371 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 TNNT3P45378 269 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 CRKLP46109 303 aaKnown RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 ALDH3A2P51648 485 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 SP3Q02447 781 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 GCNT1Q02742 428 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 ITGA9Q13797 1035 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 SQLEQ14534 574 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 TEAD2Q15562 447 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 PHKG1Q16816 387 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 CEP85LQ5SZL2 805 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 FAM219AQ8IW50 185 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 KIRREL3Q8IZU9 778 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 MARVELD2Q8N4S9 558 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 WDSUB1Q8N9V3 476 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 TMEM178AQ8NBL3 297 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 ADAD2Q8NCV1 583 aaKnown RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 ZNF248Q8NDW4 579 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 OR4K1Q8NGD4 311 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 CTCFLQ8NI51 663 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 KCNE4Q8WWG9 221 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 FAM162AQ96A26 154 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 FAM71F1Q96KD3 344 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 JAKMIP1Q96N16 626 aaKnown RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 PANK2Q9BZ23 570 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 PRRG4Q9BZD6 226 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 FN3KQ9H479 309 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 TLE6Q9H808 572 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 Q9H8V8 135 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 XAB2Q9HCS7 855 aaKnown RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 FAM207AQ9NSI2 230 aaPredicted RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 RASAL2Q9UJF2 1139 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 GRID1Q9ULK0 1009 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 WDR83OSQ9Y284 106 aa3.93□□□□□ -1.78
PTPRK-215ENST00000498284 MRPS28Q9Y2Q9 187 aaKnown RBP3.93□□□□□ -1.78
PTPRK-215ENST00000498284 A0A087WW49 117 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 A0A1W2PPK0 400 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 FAM170AA1A519 330 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 SLCO1B7G3V0H7 640 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 CCDC188H7C350 402 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 NR5A2O00482 541 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 PSMA7O14818 248 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 ARPC2O15144 300 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 DDHD2O94830 711 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 MOCS3O95396 460 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 IGLV1-44P01699 117 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 RAF1P04049 648 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 GBAP04062 536 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 EPCAMP16422 314 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 ZNF26P17031 533 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-215ENST00000498284 ACAT1P24752 427 aaKnown RBP3.92□□□□□ -1.78
PTPRK-215ENST00000498284 HOXC13P31276 330 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 CSTF2P33240 577 aaKnown RBP eCLIP3.92□□□□□ -1.78
PTPRK-215ENST00000498284 UBASH3AP57075 661 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 PMP22Q01453 160 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 SCN1BQ07699 218 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 KLC1Q07866 573 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 TUBB2AQ13885 445 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 CCDC184Q52MB2 194 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 PDLIM3Q53GG5 364 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-215ENST00000498284 SLC25A53Q5H9E4 307 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 SLC35D3Q5M8T2 416 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 C6orf136Q5SQH8 315 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 PSRC1Q6PGN9 363 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-215ENST00000498284 MOXD1Q6UVY6 613 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 ENPP7Q6UWV6 458 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 OR13C3Q8NGS6 347 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 DYRK2Q92630 601 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 GMPPAQ96IJ6 420 aaPredicted RBP3.92□□□□□ -1.78
PTPRK-215ENST00000498284 CCDC114Q96M63 670 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 TUBB2BQ9BVA1 445 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 SLC2A11Q9BYW1 496 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 PITPNM3Q9BZ71 974 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 SHARPINQ9H0F6 387 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 ATP13A3Q9H7F0 1226 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 SNX7Q9UNH6 387 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 TNNQ9UQP3 1299 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 PYGO1Q9Y3Y4 419 aa3.92□□□□□ -1.78
PTPRK-215ENST00000498284 HTR3EA5X5Y0 456 aa3.91□□□□□ -1.78
PTPRK-215ENST00000498284 CASTOR2A6NHX0 329 aa3.91□□□□□ -1.78
PTPRK-215ENST00000498284 MSGN1A6NI15 193 aa3.91□□□□□ -1.78
PTPRK-215ENST00000498284 MYL6BP14649 208 aa3.91□□□□□ -1.78
PTPRK-215ENST00000498284 CEBPBP17676 345 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms