RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 SUPT7LO94864 414 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 BPGMP07738 259 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 RPS17P08708 135 aaKnown RBP13.08□□□□□ -0.32
CPNE1-227ENST00000498056 CDH1P12830 882 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 PVRP15151 417 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 CHN1P15882 459 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 MAGP20916 626 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 PRDX3P30048 256 aaKnown RBP13.08□□□□□ -0.32
CPNE1-227ENST00000498056 ATP1A2P50993 1020 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 PRKAA2P54646 552 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 CLDN6P56747 220 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 CFHR1Q03591 330 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 ASPHQ12797 758 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 ILKQ13418 452 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 PCBP2Q15366 365 aaKnown RBP eCLIP13.08□□□□□ -0.323e-10■□□□□ 8.4
CPNE1-227ENST00000498056 CFAP157Q5JU67 520 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 ZNF678Q5SXM1 525 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 PHF19Q5T6S3 580 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 DHRS13Q6UX07 377 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 ZCCHC23Q6ZST2 131 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 TMPRSS9Q7Z410 1059 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 C17orf64Q86WR6 236 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 KLHDC8AQ8IYD2 350 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 OR2L3Q8NG85 312 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 OR2A1Q8NGT9 310 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 WDR48Q8TAF3 677 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 FLVCR1-AS1Q8TAF5 88 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 MDM1Q8TC05 714 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 DYDC1Q8WWB3 177 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 CCDC74BQ96LY2 380 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 NSUN5Q96P11 429 aaKnown RBP13.08□□□□□ -0.32
CPNE1-227ENST00000498056 MAP3K3Q99759 626 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 HAUS8Q9BT25 410 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 PITPNM3Q9BZ71 974 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 PCBD2Q9H0N5 130 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 SLC6A20Q9NP91 592 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 MRPS30Q9NP92 439 aaKnown RBP13.08□□□□□ -0.32
CPNE1-227ENST00000498056 SEMA4BQ9NPR2 832 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-227ENST00000498056 INTS7Q9NVH2 962 aaKnown RBP13.08□□□□□ -0.32
CPNE1-227ENST00000498056 CUEDC1Q9NWM3 386 aaPredicted RBP13.08□□□□□ -0.32
CPNE1-227ENST00000498056 OXSMQ9NWU1 459 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 SOHLH2Q9NX45 425 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 APOBEC2Q9Y235 224 aaKnown RBP13.08□□□□□ -0.32
CPNE1-227ENST00000498056 KLHL20Q9Y2M5 609 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 PCDHGA1Q9Y5H4 931 aa13.08□□□□□ -0.32
CPNE1-227ENST00000498056 NTN3O00634 580 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 CLGNO14967 610 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 KIF1CO43896 1103 aaKnown RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 DHRS4L1P0CG22 281 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 CEACAM1P13688 526 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 HOXB3P14651 431 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 EPB42P16452 691 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 TSPAN8P19075 237 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 GGT5P36269 586 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 MLLT3P42568 568 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 PIK3CGP48736 1102 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 SEPHS1P49903 392 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 WDR4P57081 412 aaKnown RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 YBX1P67809 324 aaKnown RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 INSM1Q01101 510 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 GTF2H2Q13888 395 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 CHI3L2Q15782 390 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 SLC5A12Q1EHB4 618 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 CACHD1Q5VU97 1274 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 KIAA1614Q5VZ46 1190 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 GTF2H2CQ6P1K8 395 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 TMEM71Q6P5X7 295 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 WDR74Q6RFH5 385 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 RBM44Q6ZP01 1051 aaKnown RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 NUDCD3Q8IVD9 361 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 C19orf47Q8N9M1 422 aaKnown RBP13.07□□□□□ -0.32
CPNE1-227ENST00000498056 SLC5A11Q8WWX8 675 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 NEIL2Q969S2 332 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 L3HYPDHQ96EM0 354 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 CD180Q99467 661 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 RTKNQ9BST9 563 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 RAB33BQ9H082 229 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 PRM3Q9NNZ6 103 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 KCNE2Q9Y6J6 123 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 SPEGQ15772 3267 aa13.07□□□□□ -0.32
CPNE1-227ENST00000498056 SPTBP11277 2137 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 CFAP54Q96N23 3096 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 PRICKLE3O43900 615 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-227ENST00000498056 NRP2O60462 931 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 TRIM13O60858 407 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 KATNA1O75449 491 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 C9P02748 559 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 THRAP10827 490 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 FGF3P11487 239 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-227ENST00000498056 ST6GAL1P15907 406 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 LSSP48449 732 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 ARL4DP49703 201 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 SLC18A1P54219 525 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 NAGLUP54802 743 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 CDH13P55290 713 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 DNAJB13P59910 316 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 E2F1Q01094 437 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 MEF2AQ02078 507 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-227ENST00000498056 NAA25Q14CX7 972 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms