RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SYAP1Q96A49 352 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 OTULINQ96BN8 352 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 C5orf30Q96GV9 206 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 FBXL20Q96IG2 436 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 METTL2AQ96IZ6 378 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 C16orf45Q96MC5 204 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 NUDCD1Q96RS6 583 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 FAM118BQ9BPY3 351 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MSTO1Q9BUK6 570 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TM2D2Q9BX73 214 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MOV10L1Q9BXT6 1211 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC5A7Q9GZV3 580 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TSPYL1Q9H0U9 437 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 WNT5BQ9H1J7 359 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 KCNN2Q9H2S1 579 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 KLHL31Q9H511 634 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF304Q9HCX3 659 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MMP25Q9NPA2 562 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZFP64Q9NPA5 681 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 DNAJC11Q9NVH1 559 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 FOXJ2Q9P0K8 574 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TBK1Q9UHD2 729 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 TRMT6Q9UJA5 497 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 HOOK1Q9UJC3 728 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SH3BGRL2Q9UJC5 107 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ITGA11Q9UKX5 1188 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 ERVK-11Q9UQG0 969 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 EPN1Q9Y6I3 576 aaPredicted RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SQORQ9Y6N5 450 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC4A4Q9Y6R1 1079 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 VPS13CQ709C8 3753 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 IL16Q14005 1332 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MROH5Q6ZUA9 1318 aa2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 PRRC2CQ9Y520 2896 aaKnown RBP2.39□□□□□ -2.03
CKS1BP2-201ENST00000497342 MIA3Q5JRA6 1907 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 VWFP04275 2813 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CUBNO60494 3623 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 HYDINQ4G0P3 5121 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 A0A1B0GWJ7 208 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CPED1A4D0V7 1026 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 RGSL1A5PLK6 1076 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 KRT87PA6NCN2 255 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 GAGE12JA6NER3 117 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 HEPACAM2A8MVW5 462 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 O00370 1275 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 NOL3O60936 208 aaKnown RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 ATG13O75143 517 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPAG6O75602 509 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 PALMO75781 387 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CBX6O95503 412 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 ESRRBO95718 433 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 SNAI1O95863 264 aaPredicted RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 TTLL1O95922 423 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 PLAUP00749 431 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CSN3P07498 182 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CHRM2P08172 466 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 IL7RP16871 459 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 UGT1A1P22309 533 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 ASMTP46597 345 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CCT8P50990 548 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 PTENP60484 403 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 KCNJ10P78508 379 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 HSPB3Q12988 150 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 NAE1Q13564 534 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 DOCK1Q14185 1865 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 RCN2Q14257 317 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 MELKQ14680 651 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 ANKDD1AQ495B1 522 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 HS1BP3Q53T59 392 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 DCAF6Q58WW2 860 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 SPATA46Q5T0L3 261 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CES4AQ5XG92 561 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CEP85Q6P2H3 762 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 DHRS13Q6UX07 377 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 LRIG3Q6UXM1 1119 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF517Q6ZMY9 492 aaPredicted RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZNF813Q6ZN06 617 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 DEF8Q6ZN54 512 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 MCM10Q7L590 875 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 ATG9AQ7Z3C6 839 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 PRSS42Q7Z5A4 293 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 MRGPREQ86SM8 312 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 PATL1Q86TB9 770 aaKnown RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 PEG10Q86TG7 708 aaKnown RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 TBC1D21Q8IYX1 336 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 MYOCDQ8IZQ8 938 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 FBXW8Q8N3Y1 598 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 SFRP1Q8N474 314 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 ZCCHC9Q8N567 271 aaKnown RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 GCSAMQ8N6F7 178 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 SCCPDHQ8NBX0 429 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 LPCAT1Q8NF37 534 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 IPMKQ8NFU5 416 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CMASQ8NFW8 434 aaPredicted RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 OR8K5Q8NH50 307 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 IL17DQ8TAD2 202 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 CACTINQ8WUQ7 758 aaKnown RBP2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 SLC5A11Q8WWX8 675 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 KAT2BQ92831 832 aa2.38□□□□□ -2.03
CKS1BP2-201ENST00000497342 P2RX5Q93086 422 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms