RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 OR2AP1Q8NGE2 309 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 OR4A15Q8NGL6 344 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 GTF2H4Q92759 462 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 COL26A1Q96A83 441 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 CAPNS2Q96L46 248 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 HERC2P3Q9BVR0 1158 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 OR2AG1Q9H205 316 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 FAM83DQ9H4H8 585 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 SUV39H2Q9H5I1 410 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 TAS2R16Q9NYV7 291 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 SPG21Q9NZD8 308 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 TMEM98Q9Y2Y6 226 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 PCDH8O95206 1070 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 DNTTP04053 509 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 HTR7P34969 479 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 TRAF3Q13114 568 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 TCTN1Q2MV58 587 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 KLHL17Q6TDP4 642 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 CRTC1Q6UUV9 634 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 CEP68Q76N32 757 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 PHYKPLQ8IUZ5 450 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 CCDC103Q8IW40 242 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 JPH3Q8WXH2 748 aaPredicted RBP13.08□□□□□ -0.32
GPC1-209ENST00000495100 DPF3Q92784 378 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 TMEM203Q969S6 136 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 NACC2Q96BF6 587 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 IGSF21Q96ID5 467 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 HSH2DQ96JZ2 352 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 PHOX2BQ99453 314 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 C11orf16Q9NQ32 467 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 EQTNQ9NQ60 294 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 SRRDQ9UH36 339 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 DUSP12Q9UNI6 340 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 ASF1AQ9Y294 204 aa13.08□□□□□ -0.32
GPC1-209ENST00000495100 A0A096LPI6 279 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 MAGEB17A8MXT2 336 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 TTC34A8MYJ7 566 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 NDUFS2O75306 463 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 C21orf33P30042 268 aaPredicted RBP13.07□□□□□ -0.32
GPC1-209ENST00000495100 GPC1P35052 558 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 HSPB3Q12988 150 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 RGS21Q2M5E4 152 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 LY6G5CQ5SRR4 150 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 C6orf141Q5SZD1 244 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 CYP4Z1Q86W10 505 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 TICAM1Q8IUC6 712 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 RAVER1Q8IY67 606 aaKnown RBP13.07□□□□□ -0.32
GPC1-209ENST00000495100 OR8H2Q8N162 312 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 TEX26Q8N6G2 289 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 C12orf76Q8N812 135 aaPredicted RBP13.07□□□□□ -0.32
GPC1-209ENST00000495100 NDNFQ8TB73 568 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 ZUFSPQ96AP4 578 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 AP2M1Q96CW1 435 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 ZHX1-C8orf76Q96EF9 292 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 SH3GL1Q99961 368 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 SLC25A37Q9NYZ2 338 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 E7EQ34 232 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 SLC28A1O00337 649 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 VNN2O95498 520 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 CSF2RAP15509 400 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 INAQ16352 499 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 COLEC12Q5KU26 742 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 DEF8Q6ZN54 512 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 VPS37AQ8NEZ2 397 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 RHBDF1Q96CC6 855 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 DNAJC11Q9NVH1 559 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 ARMC1Q9NVT9 282 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 ZIM2Q9NZV7 527 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 DNAJB9Q9UBS3 223 aa13.07□□□□□ -0.32
GPC1-209ENST00000495100 RP1L1Q8IWN7 2480 aaPredicted RBP13.07□□□□□ -0.32
GPC1-209ENST00000495100 ELFN1P0C7U0 828 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 RRM2P31350 389 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 ST8SIA6P61647 398 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 NFATC3Q12968 1075 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 CPTPQ5TA50 214 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 FRG2Q64ET8 278 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 DUS1LQ6P1R4 473 aaKnown RBP13.06□□□□□ -0.32
GPC1-209ENST00000495100 DLEU7Q6UYE1 221 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 CENPSQ8N2Z9 138 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 FRG2BQ96QU4 278 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 TRIB3Q96RU7 358 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 KCNS3Q9BQ31 491 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 GPATCH1Q9BRR8 931 aaKnown RBP13.06□□□□□ -0.32
GPC1-209ENST00000495100 ACTL8Q9H568 366 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 MAGEE1Q9HCI5 957 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 FZD4Q9ULV1 537 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 TSC22D4Q9Y3Q8 395 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.06□□□□□ -0.32
GPC1-209ENST00000495100 KRBA1A5PL33 1030 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 ANTXRLA6NF34 631 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 LEFTY1O75610 366 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 SLC16A8O95907 504 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 MYF6P23409 242 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 GRK3P35626 688 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 DCTP40126 519 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 OPRL1P41146 370 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 NSG1P42857 185 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 ALDH6A1Q02252 535 aaKnown RBP13.06□□□□□ -0.32
GPC1-209ENST00000495100 C2orf80Q0P641 193 aa13.06□□□□□ -0.32
GPC1-209ENST00000495100 GRIN2CQ14957 1233 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms