RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 GPR88Q9GZN0 384 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 TMEM117Q9H0C3 514 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 TSPYL1Q9H0U9 437 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 TTYH1Q9H313 450 aaPredicted RBP2.16□□□□□ -2.06
PTPN12-212ENST00000494248 DCTPP1Q9H773 170 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 DDX31Q9H8H2 851 aaKnown RBP2.16□□□□□ -2.06
PTPN12-212ENST00000494248 PSTPIP2Q9H939 334 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 POLR1BQ9H9Y6 1135 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 GPN1Q9HCN4 374 aaPredicted RBP2.16□□□□□ -2.06
PTPN12-212ENST00000494248 PNRC2Q9NPJ4 139 aaKnown RBP2.16□□□□□ -2.06
PTPN12-212ENST00000494248 PIH1D3Q9NQM4 214 aaKnown RBP2.16□□□□□ -2.06
PTPN12-212ENST00000494248 FSCN3Q9NQT6 498 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 RRP7BPQ9NSQ0 103 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 TBC1D13Q9NVG8 400 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 MTPAPQ9NVV4 582 aaKnown RBP eCLIP2.16□□□□□ -2.06
PTPN12-212ENST00000494248 FAM120CQ9NX05 1096 aaKnown RBP2.16□□□□□ -2.06
PTPN12-212ENST00000494248 BARHL2Q9NY43 387 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 SPG21Q9NZD8 308 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 OGFRQ9NZT2 677 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 KCNN3Q9UGI6 736 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 CD300AQ9UGN4 299 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 CD207Q9UJ71 328 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 GMEB2Q9UKD1 530 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 ANGPTL2Q9UKU9 493 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 NUDCQ9Y266 331 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 ZBTB1Q9Y2K1 713 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 MRPS2Q9Y399 296 aaKnown RBP2.16□□□□□ -2.06
PTPN12-212ENST00000494248 UBE4BO95155 1302 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 ACEP12821 1306 aa2.16□□□□□ -2.06
PTPN12-212ENST00000494248 COL2A1P02458 1487 aaPredicted RBP2.15□□□□□ -2.06
PTPN12-212ENST00000494248 NPC1L1Q9UHC9 1359 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 TEX13CA0A0J9YWL9 993 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 LOC100506127A0A0U1RQW1 187 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 C2orf92A0A1B0GVN3 265 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 A0A1W2PRG0 241 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 SDR42E2A6NKP2 422 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 LRRC53A6NM62 1247 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 SLC38A8A6NNN8 435 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 SPECC1L-ADORA2AF8WAN1 911 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 H0YHG0 523 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 WRBO00258 174 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 PRRG1O14668 218 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 PER2O15055 1255 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 LDLRAD4O15165 306 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 OGTO15294 1046 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 LRRTM2O43300 516 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 SPRY1O43609 319 aaPredicted RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 SULT1B1O43704 296 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 EXTL3O43909 919 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 TSPAN1O60635 241 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 MITFO75030 526 aaPredicted RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 TRIM3O75382 744 aaPredicted RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 ECI2O75521 394 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CRTAPO75718 401 aaPredicted RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 OR6B1O95007 311 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CER1O95813 267 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 SLC16A8O95907 504 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CH25HO95992 272 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 OPN1LWP04000 364 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 SERPING1P05155 500 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 YES1P07947 543 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 SRPRAP08240 638 aaKnown RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CYP3A4P08684 503 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 F7P08709 466 aaPredicted RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 C8orf89P0DMQ9 161 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CKMT2P17540 419 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CTPS1P17812 591 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 NR1D1P20393 614 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 ACHEP22303 614 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 U2AF2P26368 475 aaKnown RBP eCLIP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CD27P26842 260 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 RPL9P32969 192 aaKnown RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 FRKP42685 505 aaPredicted RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CDKN1BP46527 198 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 HAAOP46952 286 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 GABRB2P47870 512 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CAMPP49913 170 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 MFAP3P55082 362 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 UCP2P55851 309 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 TAS2R40P59535 323 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 TPM4P67936 248 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 IRX1P78414 480 aaPredicted RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 EFNB1P98172 346 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 GCNT1Q02742 428 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 TRAP1Q12931 704 aaKnown RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 TRAF1Q13077 416 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 SNTB2Q13425 540 aaKnown RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 VEPH1Q14D04 833 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 NCF4Q15080 339 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CHRNA6Q15825 494 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 CCDC6Q16204 474 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 Q3ZCU0 254 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 MCMDC2Q4G0Z9 681 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 FBXO43Q4G163 708 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 IGSF11Q5DX21 431 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 ENTPD8Q5MY95 495 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 ARHGEF16Q5VV41 709 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 KIAA0930Q6ICG6 404 aaPredicted RBP2.15□□□□□ -2.07
PTPN12-212ENST00000494248 OR6B2Q6IFH4 312 aa2.15□□□□□ -2.07
PTPN12-212ENST00000494248 TMEM88Q6PEY1 159 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms