RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 CEACAM4O75871 244 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 MOCS3O95396 460 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 CLDN1O95832 211 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 SLC2A2P11168 524 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-216ENST00000493758 JAK1P23458 1154 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 HLA-FP30511 346 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 GCNT1Q02742 428 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 CALD1Q05682 793 aaKnown RBP3.63□□□□□ -1.83
ITGB1-216ENST00000493758 SRSF9Q13242 221 aaKnown RBP eCLIP3.63□□□□□ -1.83
ITGB1-216ENST00000493758 DRP2Q13474 957 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 SQLEQ14534 574 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 GLIPR1L2Q4G1C9 344 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 TCTE1Q5JU00 501 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 LYSMD4Q5XG99 296 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 HOGA1Q86XE5 327 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 RASGEF1AQ8N9B8 481 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 OR4K1Q8NGD4 311 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 MAPK15Q8TD08 544 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 ROBO4Q8WZ75 1007 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 AGAP3Q96P47 875 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 LPAR4Q99677 370 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 PKP2Q99959 881 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 ZMYND12Q9H0C1 365 aa3.63□□□□□ -1.83
ITGB1-216ENST00000493758 C19orf25Q9UFG5 118 aaPredicted RBP3.63□□□□□ -1.83
ITGB1-216ENST00000493758 CPSF3Q9UKF6 684 aaKnown RBP3.63□□□□□ -1.83
ITGB1-216ENST00000493758 A0A1B0GVY2 172 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 CASTOR2A6NHX0 329 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 EPM2AB3EWF7 344 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 UBE2CO00762 179 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 TEX28O15482 410 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 CRLF1O75462 422 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 FYNP06241 537 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 MMP12P39900 470 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 RAD52P43351 418 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 CSNK2BP67870 215 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 ZNF74Q16587 644 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 C2CD6Q53TS8 623 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 OR4A47Q6IF82 309 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 C16orf54Q6UWD8 224 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 PLPPR4Q7Z2D5 763 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 LRRTM1Q86UE6 522 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 IQCHQ86VS3 1027 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 CATSPERDQ86XM0 798 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 LYG1Q8N1E2 194 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 RYBPQ8N488 228 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-216ENST00000493758 GPRC5AQ8NFJ5 357 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 VANGL1Q8TAA9 524 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-216ENST00000493758 HDAC11Q96DB2 347 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 FAM71F1Q96KD3 344 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-216ENST00000493758 LINC00615Q96LM1 132 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-216ENST00000493758 NKX3-1Q99801 234 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-216ENST00000493758 VGLL1Q99990 258 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 SLF1Q9BQI6 1058 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 FAM49AQ9H0Q0 323 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-216ENST00000493758 TNNQ9UQP3 1299 aa3.62□□□□□ -1.83
ITGB1-216ENST00000493758 TRAV24A0A0B4J272 114 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 TRBV5-5A0A0J9YX44 114 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 A0A1W2PR80 420 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 CCDC188H7C350 402 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 ZNF195O14628 629 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 SPRY1O43609 319 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-216ENST00000493758 PSMD10O75832 226 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 DDHD2O94830 711 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 ZSCAN5DPP0CG00 497 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 MYBL1P10243 752 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 DARSP14868 501 aaKnown RBP3.61□□□□□ -1.83
ITGB1-216ENST00000493758 AKR1B1P15121 316 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 CYP11B2P19099 503 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 OPRL1P41146 370 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 CAPZA2P47755 286 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 RAB28P51157 221 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 RALGDSQ12967 914 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 SLC1A5Q15758 541 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 KYNUQ16719 465 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 FASTKD1Q53R41 847 aaKnown RBP3.61□□□□□ -1.83
ITGB1-216ENST00000493758 CST9LP1Q5W188 147 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 LGI2Q8N0V4 545 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 GTF3AQ92664 365 aaKnown RBP3.61□□□□□ -1.83
ITGB1-216ENST00000493758 PGAP3Q96FM1 320 aaPredicted RBP3.61□□□□□ -1.83
ITGB1-216ENST00000493758 C18orf12Q96KH6 178 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 PIGQQ9BRB3 760 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 UBXN6Q9BZV1 441 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 MED20Q9H944 212 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 TTLL3Q9Y4R7 772 aa3.61□□□□□ -1.83
ITGB1-216ENST00000493758 A0A087WUV0 522 aaPredicted RBP3.6□□□□□ -1.83
ITGB1-216ENST00000493758 ERI2A8K979 691 aaKnown RBP3.6□□□□□ -1.83
ITGB1-216ENST00000493758 SOCS3O14543 225 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 ATP6AP2O75787 350 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 MC5RP33032 325 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 HNF4AP41235 474 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 CCR10P46092 362 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 POLR2LP62875 67 aaKnown RBP3.6□□□□□ -1.83
ITGB1-216ENST00000493758 IRX4P78413 519 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 MYL7Q01449 175 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 NFATC2Q13469 925 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 LY6DQ14210 128 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 FASTKD3Q14CZ7 662 aaKnown RBP3.6□□□□□ -1.83
ITGB1-216ENST00000493758 TAB1Q15750 504 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 EXT1Q16394 746 aa3.6□□□□□ -1.83
ITGB1-216ENST00000493758 LETM2Q2VYF4 491 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms