RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 USP17L19D6RCP7 530 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 USP17L20D6RJB6 530 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 F5H423 210 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF195O14628 629 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PCDH17O14917 1159 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ARPC2O15144 300 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TCAPO15273 167 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 SIGLEC5O15389 551 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 MRPS14O60783 128 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 MMP20O60882 483 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF623O75123 536 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 KHDRBS3O75525 346 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TOXO94900 526 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RPLP0P05388 317 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GPIP06744 558 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 HNRNPLP14866 589 aaKnown RBP eCLIP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 NDUFB7P17568 137 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CD6P30203 668 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TNFSF8P32971 234 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 NNMTP40261 264 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PIK3CGP48736 1102 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 NAGLUP54802 743 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 SIGLEC14Q08ET2 396 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 USP17L24Q0WX57 530 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TP53BP2Q13625 1128 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 BAK1Q16611 211 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GPR33Q49SQ1 333 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 C1orf220Q5T0J3 134 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GPR139Q6DWJ6 353 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RBMS3Q6XE24 437 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ZZZ3Q8IYH5 903 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TTC29Q8NA56 475 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GATAD2BQ8WXI9 593 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GTF3AQ92664 365 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 SLC38A4Q969I6 547 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TMBIM1Q969X1 311 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 LRRC46Q96FV0 321 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ZC3H10Q96K80 434 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RIT2Q99578 217 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 KLHL31Q9H511 634 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RC3H2Q9HBD1 1191 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PDLIM7Q9NR12 457 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 MYEF2Q9P2K5 600 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 SLC17A6Q9P2U8 582 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 EIF2B4Q9UI10 523 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CDH9Q9ULB4 789 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CA5BQ9Y2D0 317 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TCRBV16S1A1N1A0A5B0 115 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ARHGEF33A8MVX0 844 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF879B4DU55 563 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 C9JVG2 144 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 G3V2T6 193 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 G3V3G9 751 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 OIP5O43482 229 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 AHSGP02765 367 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 S100A8P05109 93 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ITGAVP06756 1048 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TCF3P15923 654 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RFX1P22670 979 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GNALP38405 381 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 NRIP1P48552 1158 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GNG10P50151 68 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 XKP51811 444 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CASP9P55211 416 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CDH8P55286 799 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RRAS2P62070 204 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PRKAA1Q13131 559 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PDK2Q15119 407 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 AP5B1Q2VPB7 878 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CTU2Q2VPK5 515 aaKnown RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GFOD2Q3B7J2 385 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 XKR9Q5GH70 373 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 OR2B11Q5JQS5 317 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 DCAF8Q5TAQ9 597 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 MANEALQ5VSG8 457 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 KIAA1614Q5VZ46 1190 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ATRAIDQ6UW56 229 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 SCIMPQ6UWF3 145 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 MOB2Q70IA6 237 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CMC1Q7Z7K0 106 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ZER1Q7Z7L7 766 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RBFAQ8N0V3 343 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 DAW1Q8N136 415 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 DNAAF3Q8N9W5 541 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 AGAP2Q99490 1192 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 TRMOQ9BU70 441 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 GATA5Q9BWX5 397 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ITPAQ9BY32 194 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RASSF1Q9NS23 344 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 FAM118AQ9NWS6 357 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 VSX1Q9NZR4 365 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 NDRG3Q9UGV2 375 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 MUTYHQ9UIF7 546 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 SLC9A8Q9Y2E8 581 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 RAP2CQ9Y3L5 183 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 KIAA1671Q9BY89 1806 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 ZNF197O14709 1029 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 PRMT5O14744 637 aaPredicted RBP6.69□□□□□ -1.34
VPS13B-205ENST00000493587 BCKDKO14874 412 aa6.69□□□□□ -1.34
VPS13B-205ENST00000493587 CDC123O75794 336 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms