RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 CD63P08962 238 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 PRF1P14222 555 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 UGT2B7P16662 529 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 MSH3P20585 1137 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 CYP2A7P20853 494 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 COMTP21964 271 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 MMP11P24347 488 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 PDHA2P29803 388 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 PBLDP30039 288 aaPredicted RBP6.73□□□□□ -1.33
CAB39-206ENST00000493540 AKT1P31749 480 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 SSR1P43307 286 aaKnown RBP6.73□□□□□ -1.33
CAB39-206ENST00000493540 ARCN1P48444 511 aaKnown RBP6.73□□□□□ -1.33
CAB39-206ENST00000493540 GEMP55040 296 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 SLC5A12Q1EHB4 618 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 PRAMEF13Q5VWM6 474 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 RPUSD3Q6P087 351 aaKnown RBP6.73□□□□□ -1.33
CAB39-206ENST00000493540 MICALCLQ6ZW33 695 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 KCNMB4Q86W47 210 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 AMIGO1Q86WK6 493 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 RFX6Q8HWS3 928 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 PIANPQ8IYJ0 282 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 ACBD4Q8NC06 268 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 OR4E2Q8NGC2 313 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 OR8K1Q8NGG5 319 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 OR5K2Q8NHB8 316 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.73□□□□□ -1.33
CAB39-206ENST00000493540 HEXDCQ8WVB3 486 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 LCN9Q8WX39 176 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 ULK4Q96C45 1275 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 CLIP3Q96DZ5 547 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 FER1L6-AS2Q96M78 137 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 C5orf34Q96MH7 638 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 FERD3LQ96RJ6 166 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 CHP1Q99653 195 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 WDR77Q9BQA1 342 aaPredicted RBP6.73□□□□□ -1.33
CAB39-206ENST00000493540 SRMSQ9H3Y6 488 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 SLAMF7Q9NQ25 335 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 CASS4Q9NQ75 786 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 OR6C2Q9NZP2 312 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 FEZ2Q9UHY8 353 aaPredicted RBP6.73□□□□□ -1.33
CAB39-206ENST00000493540 CDYLQ9Y232 598 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 HS3ST3B1Q9Y662 390 aa6.73□□□□□ -1.33
CAB39-206ENST00000493540 VSTM2BA6NLU5 285 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 LIN7AO14910 233 aaPredicted RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 PRICKLE3O43900 615 aaPredicted RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 AGTP01019 485 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 F13BP05160 661 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 ALPPP05187 535 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 CHRM5P08912 532 aaPredicted RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 ITGALP20701 1170 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 PSMB4P28070 264 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 RBL1P28749 1068 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 PKLRP30613 574 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 FOXN2P32314 431 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 SHMT2P34897 504 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 CTNNA1P35221 906 aaKnown RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 CDKN1CP49918 316 aaPredicted RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 FOXL2P58012 376 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 DYNLT1P63172 113 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 ACVR1Q04771 509 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 PRKAA1Q13131 559 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 AIMP2Q13155 320 aaKnown RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 TBX2Q13207 712 aaPredicted RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 ITIH4Q14624 930 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 ZRSR2Q15696 482 aaKnown RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 INAQ16352 499 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 CYP27C1Q4G0S4 372 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 NKAIN1Q4KMZ8 207 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 FBXW10Q5XX13 1052 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 CCDC70Q6NSX1 233 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 CAVIN1Q6NZI2 390 aaKnown RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 TLDC1Q6P9B6 456 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 DET1Q7L5Y6 550 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 VSTM4Q8IW00 320 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 ARHGEF39Q8N4T4 335 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 SLC25A41Q8N5S1 370 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 LINC01555Q8NAE3 123 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 CLEC1AQ8NC01 280 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 OR5AR1Q8NGP9 310 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 KRT35Q92764 455 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 P3H4Q92791 437 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.72□□□□□ -1.33
CAB39-206ENST00000493540 RELTQ969Z4 430 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 SGSM3Q96HU1 749 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 DNAJC1Q96KC8 554 aaKnown RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 COPS8Q99627 209 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 HGH1Q9BTY7 390 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 FSD1LQ9BXM9 530 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 AP1M1Q9BXS5 423 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 GOLPH3Q9H4A6 298 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 ASB8Q9H765 288 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 MRM3Q9HC36 420 aaKnown RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 SLC6A20Q9NP91 592 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 SPTLC3Q9NUV7 552 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 NLE1Q9NVX2 485 aaPredicted RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 SPHK1Q9NYA1 384 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 IFNKQ9P0W0 207 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 KLHL8Q9P2G9 620 aaPredicted RBP6.72□□□□□ -1.33
CAB39-206ENST00000493540 RSPH14Q9UHP6 348 aa6.72□□□□□ -1.33
CAB39-206ENST00000493540 SERTAD3Q9UJW9 196 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms