RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 ZBTB14O43829 449 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 GPC4O75487 556 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 SLCO2B1O94956 709 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 CAPN1P07384 714 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 UQCRHP07919 91 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 INHBAP08476 426 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 TPBGLP0DKB5 382 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 ENO3P13929 434 aaPredicted RBP10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 CNTFP26441 200 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 ECHS1P30084 290 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 SERPINB9P50453 376 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 IL2P60568 153 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 RPS15P62841 145 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 POU4F1Q01851 419 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 PRKG2Q13237 762 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 PTCHD3Q3KNS1 767 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 HECTD2Q5U5R9 776 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 NEK10Q6ZWH5 1172 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 SYVN1Q86TM6 617 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 TRIM73Q86UV7 250 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 TMEM151BQ8IW70 566 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 ADGRF3Q8IZF5 1079 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 DSELQ8IZU8 1212 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 KRT222Q8N1A0 295 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 FAM26EQ8N5C1 309 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 ENDOVQ8N8Q3 282 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 LCN9Q8WX39 176 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 TRAPPC9Q96Q05 1148 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 TRIM54Q9BYV2 358 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 PITPNM3Q9BZ71 974 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 SRMSQ9H3Y6 488 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 RHOJQ9H4E5 214 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 PCMTD2Q9NV79 361 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 ICKQ9UPZ9 632 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 FARSAQ9Y285 508 aaKnown RBP10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 ASF1AQ9Y294 204 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 PCM1Q15154 2024 aa10.63□□□□□ -0.71
TMEM39A-211ENST00000491685 NOTCH2Q04721 2471 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 ICE1Q9Y2F5 2266 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 POC1B-GALNT4F8VUJ3 575 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 MEN1O00255 615 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 RIPK2O43353 540 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 KRT38O76015 456 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 KLK3P07288 261 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 CTSBP07858 339 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 ABHD2P08910 425 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 HIST1H2AGP0C0S8 130 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 H2AFXP16104 143 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 HIST1H2ADP20671 130 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 SAT1P21673 171 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 PRDX3P30048 256 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 ATP5DP30049 168 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 CD97P48960 835 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 FOXL2P58012 376 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 SLC29A2Q14542 456 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 USP10Q14694 798 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 UAP1Q16222 522 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 DEFB110Q30KQ9 67 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 NADK2Q4G0N4 442 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 ZNF385CQ66K41 422 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 CDHR3Q6ZTQ4 885 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 CCDC91Q7Z6B0 441 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 ZC3HC1Q86WB0 502 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 TBC1D21Q8IYX1 336 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 SLC22A15Q8IZD6 547 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 NKAPQ8N5F7 415 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 TEX19Q8NA77 164 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 OR5AR1Q8NGP9 310 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 CFAP61Q8NHU2 1237 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 FLVCR1-AS1Q8TAF5 88 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 THAP4Q8WY91 577 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 HIST1H2AHQ96KK5 128 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 LRFN5Q96NI6 719 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 HIST1H2AJQ99878 128 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 C17orf62Q9BQA9 187 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 WDR83Q9BRX9 315 aaKnown RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 H2AFJQ9BTM1 129 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 FUT8Q9BYC5 575 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 ACSS3Q9H6R3 686 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 FAM60AQ9NP50 221 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 C1GALT1Q9NS00 363 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 SPHK1Q9NYA1 384 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 ACTR10Q9NZ32 417 aa10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 V9GYY5 206 aaPredicted RBP10.62□□□□□ -0.71
TMEM39A-211ENST00000491685 EXOC1LA0A1B0GW35 172 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 FAM95CA0A1B0GW59 222 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 ENO4A6NNW6 628 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 H3BMH7 237 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 NIPSNAP2O75323 286 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 FAM153BP0C7A2 387 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 MPC1LP0DKB6 136 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 STMN1P16949 149 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 GABRB3P28472 473 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 CRABP2P29373 138 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 PEBP1P30086 187 aaKnown RBP10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 CCNFP41002 786 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 CCL11P51671 97 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 ITGA1P56199 1179 aa10.61□□□□□ -0.71
TMEM39A-211ENST00000491685 VSNL1P62760 191 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms