RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 STEAP4Q687X5 459 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 RNF44Q7L0R7 432 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 MYO1HQ8N1T3 1032 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 ZNF480Q8WV37 535 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 ZFYVE21Q9BQ24 234 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 DPH7Q9BTV6 452 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 SLC6A20Q9NP91 592 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 CUTCQ9NTM9 273 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 UTP6Q9NYH9 597 aaKnown RBP14.46□□□□□ -0.09
USP39-217ENST00000491659 SLC17A6Q9P2U8 582 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 TLK1Q9UKI8 766 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 CORO1CQ9ULV4 474 aaPredicted RBP14.46□□□□□ -0.09
USP39-217ENST00000491659 TP53TG5Q9Y2B4 290 aa14.46□□□□□ -0.09
USP39-217ENST00000491659 PTRH2Q9Y3E5 179 aaKnown RBP14.46□□□□□ -0.09
USP39-217ENST00000491659 OR2A25A4D2G3 310 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 PABPN1LA6NDY0 278 aaKnown RBP14.45□□□□□ -0.1
USP39-217ENST00000491659 FAM187AA6NFU0 413 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 SUV39H1O43463 412 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 AHSGP02765 367 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 C8GP07360 202 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 GABRB3P28472 473 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 OTX2P32243 289 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 RPL21P46778 160 aaKnown RBP14.45□□□□□ -0.1
USP39-217ENST00000491659 GCGRP47871 477 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 RRADP55042 308 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 CDKN2DP55273 166 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 PDIA2Q13087 525 aaKnown RBP14.45□□□□□ -0.1
USP39-217ENST00000491659 CHAF1BQ13112 559 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 CALCOCO2Q13137 446 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 PDAP1Q13442 181 aaKnown RBP14.45□□□□□ -0.1
USP39-217ENST00000491659 FAM214AQ32MH5 1076 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 TEDDM1Q5T9Z0 273 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 THEMIS2Q5TEJ8 643 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 ICE2Q659A1 982 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 TCTN3Q6NUS6 607 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 CYHR1Q6ZMK1 362 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 MAATS1Q7Z4T9 603 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 ANKMY2Q8IV38 441 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 GPATCH11Q8N954 259 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 PPFIBP2Q8ND30 876 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 FBXO36Q8NEA4 188 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 ZNF285Q96NJ3 590 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 IP6K3Q96PC2 410 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 WDR83Q9BRX9 315 aaKnown RBP14.45□□□□□ -0.1
USP39-217ENST00000491659 TRIM55Q9BYV6 548 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 ING2Q9H160 280 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 ABCF3Q9NUQ8 709 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 CCDC88CQ9P219 2028 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 ZFATQ9P243 1243 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 G3BP2Q9UN86 482 aaKnown RBP14.45□□□□□ -0.1
USP39-217ENST00000491659 SNX24Q9Y343 169 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 HEATR5BQ9P2D3 2071 aa14.45□□□□□ -0.1
USP39-217ENST00000491659 FITM1A5D6W6 292 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 E7ENX8 843 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 SLC16A5O15375 505 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 NRP2O60462 931 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 KLF7O75840 302 aaPredicted RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 EIF2S1P05198 315 aaKnown RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 IMPA1P29218 277 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 ETF1P62495 437 aaKnown RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 ABATP80404 500 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 TAP2Q03519 686 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 PRDX1Q06830 199 aaKnown RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 ATP1A4Q13733 1029 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 FRG1Q14331 258 aaKnown RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 WASHC2DQ5SRD0 308 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 FRMPD2BQ6IN97 320 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 FAM45BPQ6NSW5 357 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 MRPL14Q6P1L8 145 aaKnown RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 TRMT10BQ6PF06 316 aaKnown RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 PAQR3Q6TCH7 311 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 ADCK2Q7Z695 626 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 SPNS2Q8IVW8 549 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 C17orf53Q8N3J3 647 aaPredicted RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 TMEM102Q8N9M5 508 aaPredicted RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 SPATA4Q8NEY3 305 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 OR2Y1Q8NGV0 311 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 FAM45AQ8TCE6 357 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 MCOLN3Q8TDD5 553 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 EEF1AKMT1Q8WVE0 214 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 FKBP10Q96AY3 582 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 LINGO1Q96FE5 620 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 PLCD4Q9BRC7 762 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 DPH5Q9H2P9 285 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 PLAC1Q9HBJ0 212 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 CCDC177Q9NQR7 707 aaPredicted RBP14.44□□□□□ -0.1
USP39-217ENST00000491659 ENAMQ9NRM1 1142 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 ANAPC2Q9UJX6 822 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 BOD1L1Q8NFC6 3051 aa14.44□□□□□ -0.1
USP39-217ENST00000491659 SPTA1P02549 2419 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 SEC16AO15027 2179 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 HYKKA2RU49 373 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 E7ESA3 106 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 EZRP15311 586 aaKnown RBP14.43□□□□□ -0.1
USP39-217ENST00000491659 NR1D1P20393 614 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 FDXRP22570 491 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 PGDP52209 483 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 TBPL1P62380 186 aa14.43□□□□□ -0.1
USP39-217ENST00000491659 YBX1P67809 324 aaKnown RBP14.43□□□□□ -0.1
USP39-217ENST00000491659 MRPS25P82663 173 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms