RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	SNX5	Q9Y5X3	404 aa		6.17	□□□□□ -1.42
FN1-223	ENST00000490833	MRPL42	Q9Y6G3	142 aa	Known RBP	6.17	□□□□□ -1.42
FN1-223	ENST00000490833	COL4A6	Q14031	1691 aa		6.17	□□□□□ -1.42
FN1-223	ENST00000490833	EDDM13	A0A1B0GTR0	161 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833		A0A1W2PRU2	124 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	TCRBV5S2	A0A599	114 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	CDC14C	A4D256	554 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	MGAT4D	A6NG13	374 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	NPIPB15	A6NHN6	443 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	C1QTNF3-AMACR	E9PGA6	284 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	CXCR6	O00574	342 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	RNASET2	O00584	256 aa	Known RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	PPP6C	O00743	305 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	GAPDHS	O14556	408 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	SLC16A6	O15403	523 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	HOXC11	O43248	304 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	SMAD6	O43541	496 aa	Known RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	ZNF821	O75541	412 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	CREG1	O75629	220 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	SORBS2	O94875	1100 aa	Known RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	KRT75	O95678	551 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	CST1	P01037	141 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	ALPI	P09923	528 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	ELFN1	P0C7U0	828 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	THRB	P10828	461 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	TYR	P14679	529 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	JUNB	P17275	347 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	GPX2	P18283	190 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	TEAD1	P28347	426 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	HLA-F	P30511	346 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	CCR7	P32248	378 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	CD70	P32970	193 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	CA8	P35219	290 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	MSX2	P35548	267 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	HAL	P42357	657 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	MTHFR	P42898	656 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	GJA8	P48165	433 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	PRLHR	P49683	370 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	CDKN1C	P49918	316 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	ANXA11	P50995	505 aa	Known RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	SGSH	P51688	502 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	MVK	Q03426	396 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	GRSF1	Q12849	480 aa	Known RBP eCLIP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	MTAP	Q13126	283 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	FADD	Q13158	208 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	E2F2	Q14209	437 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	KIAA0040	Q15053	153 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	PDGFRL	Q15198	375 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	SKIV2L	Q15477	1246 aa	Known RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	BCL7A	Q4VC05	210 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	ATP13A5	Q4VNC0	1218 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	PAGE3	Q5JUK9	113 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	PPP2R2D	Q66LE6	453 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	GRHL2	Q6ISB3	625 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	NOXRED1	Q6NXP6	359 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	MED27	Q6P2C8	311 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	GALNT18	Q6P9A2	607 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	TRIM40	Q6P9F5	258 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	RBM44	Q6ZP01	1051 aa	Known RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	PAGE2	Q7Z2X7	111 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	PIWIL3	Q7Z3Z3	882 aa	Known RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	AMIGO2	Q86SJ2	522 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	SYT12	Q8IV01	421 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	SLC22A15	Q8IZD6	547 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	LIX1	Q8N485	282 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	FAM47B	Q8NA70	645 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	GPR26	Q8NDV2	337 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	TTL	Q8NG68	377 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	OR2A12	Q8NGT7	310 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	MAGEE2	Q8TD90	523 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	RAB2B	Q8WUD1	216 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	IPCEF1	Q8WWN9	437 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	OR8D1	Q8WZ84	308 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	ELMO1	Q92556	727 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	GLYATL1	Q969I3	302 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	EID2B	Q96D98	161 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	MOCOS	Q96EN8	888 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	WDR34	Q96EX3	536 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	SLC47A1	Q96FL8	570 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	VPS50	Q96JG6	964 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	ZNF583	Q96ND8	569 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	KCNA7	Q96RP8	456 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	ARHGAP9	Q9BRR9	750 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	BHLHE41	Q9C0J9	482 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	SEMA6A	Q9H2E6	1030 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	RPF2	Q9H7B2	306 aa	Known RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	TM9SF3	Q9HD45	589 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	PALMD	Q9NP74	551 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	TLR9	Q9NR96	1032 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	B4GALT6	Q9UBX8	382 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	EGFL7	Q9UHF1	273 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	OAZ3	Q9UMX2	235 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	DYRK1B	Q9Y463	629 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	POLR3H	Q9Y535	204 aa	Predicted RBP	6.16	□□□□□ -1.42
FN1-223	ENST00000490833	PCDHGB3	Q9Y5G1	929 aa		6.16	□□□□□ -1.42
FN1-223	ENST00000490833	C7orf72	A4D263	438 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	TMEM247	A6NEH6	219 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	IQCF5	A8MTL0	148 aa		6.15	□□□□□ -1.42
FN1-223	ENST00000490833	MAGEB17	A8MXT2	336 aa		6.15	□□□□□ -1.42

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