RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 RIPK2O43353 540 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 RSL1D1O76021 490 aaKnown RBP2.82□□□□□ -1.96
UBXN4-208ENST00000490163 UMODP07911 640 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 VIMP08670 466 aaKnown RBP2.82□□□□□ -1.96
UBXN4-208ENST00000490163 PNMA6AP0CW24 399 aaPredicted RBP2.82□□□□□ -1.96
UBXN4-208ENST00000490163 CEACAM1P13688 526 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 ANXA7P20073 488 aaKnown RBP2.82□□□□□ -1.96
UBXN4-208ENST00000490163 DRD5P21918 477 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 SLC6A8P48029 635 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 PRKAG1P54619 331 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 GALCP54803 685 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 FPGSQ05932 587 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 UGT3A2Q3SY77 523 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 FASTKD1Q53R41 847 aaKnown RBP2.82□□□□□ -1.96
UBXN4-208ENST00000490163 C6orf10Q5SRN2 563 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 TREML2Q5T2D2 321 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 LRRC8BQ6P9F7 803 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 TMEM184AQ6ZMB5 413 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 DENND6AQ8IWF6 608 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 TMEM217Q8N7C4 229 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 RASSF8Q8NHQ8 419 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 CKAP2Q8WWK9 683 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 SECISBP2Q96T21 854 aaKnown RBP2.82□□□□□ -1.96
UBXN4-208ENST00000490163 MINDY3Q9H8M7 445 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 BABAM1Q9NWV8 329 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 SUN2Q9UH99 717 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 HACL1Q9UJ83 578 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 CCDC171Q6TFL3 1326 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 CACNA1FO60840 1977 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 DISP2A7MBM2 1401 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 PPIP5K1Q6PFW1 1433 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 SCN7AQ01118 1682 aa2.82□□□□□ -1.96
UBXN4-208ENST00000490163 ATP6AP2A0A1C7CYW4 349 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 TARSL2A2RTX5 802 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 GRID2IPA4D2P6 1211 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 WASH3PC4AMC7 463 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 KBTBD13C9JR72 458 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 PES1O00541 588 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 DNALI1O14645 258 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 MSI1O43347 362 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 KHDRBS3O75525 346 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 LDLRP01130 860 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 IFNA2P01563 188 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 NT5EP21589 574 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 GCKP35557 465 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 MPLP40238 635 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 EPS15P42566 896 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 ME1P48163 572 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 CTAG1AP78358 180 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 HSD11B2P80365 405 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 E2F1Q01094 437 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 AKAP17AQ02040 695 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 MXD4Q14582 209 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 ACSF3Q4G176 576 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 LCE1DQ5T752 114 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 DCAF12L2Q5VW00 463 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 NKAIN2Q5VXU1 208 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 PIP4P1Q86T03 277 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 BIVMQ86UB2 503 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 KCNMB4Q86W47 210 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 LRRC75A-AS1Q8N1F1 130 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 TMEM185AQ8NFB2 350 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 NSMAFQ92636 917 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 LMLNQ96KR4 655 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 ACTRT3Q9BYD9 372 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 SMPD3Q9NY59 655 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 STOX2Q9P2F5 926 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 MBD2Q9UBB5 411 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 CNOT6Q9ULM6 557 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 ARFGEF2Q9Y6D5 1785 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 PTPRCP08575 1304 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 MAP3K19Q56UN5 1328 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 CPDO75976 1380 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 A8MV72 311 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 KRT86O43790 486 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 SNNO75324 88 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 ERLIN2O94905 339 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 VNN1O95497 513 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 DIRAS3O95661 229 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 IFNB1P01574 187 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 DCNP07585 359 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 G6PDP11413 515 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 GCFC2P16383 781 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 ZNF37AP17032 561 aaPredicted RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 GNAT2P19087 354 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 OR1D2P34982 312 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 UGT1A5P35504 534 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 TAGLN2P37802 199 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 ZFP36L1Q07352 338 aaKnown RBP2.81□□□□□ -1.96
UBXN4-208ENST00000490163 Q6ZPA2 131 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 GSTA5Q7RTV2 222 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 KIAA1328Q86T90 577 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 TBC1D26Q86UD7 250 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 GPAT4Q86UL3 456 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 ZDHHC17Q8IUH5 632 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 FAM219AQ8IW50 185 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 CERS5Q8N5B7 392 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 NIPA2Q8N8Q9 360 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 OR14L1PQ8NHC6 308 aa2.81□□□□□ -1.96
UBXN4-208ENST00000490163 APBB2Q92870 758 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms