RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 PCSK5Q92824 1860 aa18.58■□□□□ 0.56
APTX-229ENST00000489583 ZNF839A8K0R7 811 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 PCDH17O14917 1159 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 LIASO43766 372 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 PHF2O75151 1096 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 C1orf105O95561 183 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 GCGRP47871 477 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 EIF3BP55884 814 aaKnown RBP18.57■□□□□ 0.56
APTX-229ENST00000489583 TSTA3Q13630 321 aaPredicted RBP18.57■□□□□ 0.56
APTX-229ENST00000489583 MRNIPQ6NTE8 343 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 RPUSD3Q6P087 351 aaKnown RBP18.57■□□□□ 0.56
APTX-229ENST00000489583 ZNF534Q76KX8 674 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 COX15Q7KZN9 410 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 NDUFAF7Q7L592 441 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 OR2L3Q8NG85 312 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 RERGQ96A58 199 aaPredicted RBP18.57■□□□□ 0.56
APTX-229ENST00000489583 MARVELD3Q96A59 401 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 MENTQ9BUN1 341 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.57■□□□□ 0.56
APTX-229ENST00000489583 BFARQ9NZS9 450 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 SPATA7Q9P0W8 599 aa18.57■□□□□ 0.56
APTX-229ENST00000489583 SUCOQ9UBS9 1254 aaKnown RBP18.57■□□□□ 0.56
APTX-229ENST00000489583 MRPS2Q9Y399 296 aaKnown RBP18.57■□□□□ 0.56
APTX-229ENST00000489583 CCDC88CQ9P219 2028 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 TRAV17A0A0B4J275 112 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 ARHGAP10A1A4S6 786 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 VSTM2BA6NLU5 285 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 H3BMM5 538 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 JRKO75564 520 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 HEXBP07686 556 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 ICAM2P13598 275 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 RPA3P35244 121 aaPredicted RBP18.56■□□□□ 0.56
APTX-229ENST00000489583 EMP2P54851 167 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 SESN2P58004 480 aaPredicted RBP18.56■□□□□ 0.56
APTX-229ENST00000489583 ZRSR2Q15696 482 aaKnown RBP18.56■□□□□ 0.56
APTX-229ENST00000489583 INAQ16352 499 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 RNF187Q5TA31 235 aaPredicted RBP18.56■□□□□ 0.56
APTX-229ENST00000489583 C4orf22Q6V702 233 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 GSTA5Q7RTV2 222 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 LDB1Q86U70 411 aaPredicted RBP18.56■□□□□ 0.56
APTX-229ENST00000489583 FJX1Q86VR8 437 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 SRRM1Q8IYB3 904 aaKnown RBP18.56■□□□□ 0.56
APTX-229ENST00000489583 RNF10Q8N5U6 811 aaKnown RBP18.56■□□□□ 0.56
APTX-229ENST00000489583 LKAAEAR1Q8TD35 194 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 ZNF778Q96MU6 729 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 ZNF285Q96NJ3 590 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 IL22Q9GZX6 179 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 CHRAC1Q9NRG0 131 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 FAM114A2Q9NRY5 505 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 C14orf105Q9NVL8 296 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 PTGFRNQ9P2B2 879 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 TRPC4Q9UBN4 977 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 ENTPD4Q9Y227 616 aa18.56■□□□□ 0.56
APTX-229ENST00000489583 CRYBG3Q68DQ2 2970 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 TCRBV7S2A1N4TA0A589 114 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 PRSS44E7EML9 344 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 TXNDC9O14530 226 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 ZSCAN12O43309 604 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 CTSVO60911 334 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 CCNDBP1O95273 360 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 PKMP14618 531 aaKnown RBP18.55■□□□□ 0.56
APTX-229ENST00000489583 PSMB5P28074 263 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 TNFRSF8P28908 595 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 BDKRB1P46663 353 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 SNX1Q13596 522 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 GRB7Q14451 532 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 SEMA3AQ14563 771 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 ANKRD20A4Q4UJ75 823 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 FRMPD2BQ6IN97 320 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 ZNF662Q6ZS27 426 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 TICAM1Q8IUC6 712 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 HMGCLL1Q8TB92 370 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 MVB12AQ96EY5 273 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 DPH7Q9BTV6 452 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 ACAT2Q9BWD1 397 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 MRPS30Q9NP92 439 aaKnown RBP18.55■□□□□ 0.56
APTX-229ENST00000489583 ENAMQ9NRM1 1142 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 RIC8BQ9NVN3 520 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 COPG2Q9UBF2 871 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 TEKT2Q9UIF3 430 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 DRG1Q9Y295 367 aaKnown RBP18.55■□□□□ 0.56
APTX-229ENST00000489583 CACNA1DQ01668 2161 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 CELSR2Q9HCU4 2923 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 ITPR2Q14571 2701 aa18.55■□□□□ 0.56
APTX-229ENST00000489583 E5RI56 91 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 ZG16O60844 167 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 CHRM3P20309 590 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 RPS3P23396 243 aaKnown RBP eCLIP18.54■□□□□ 0.56
APTX-229ENST00000489583 HSD17B2P37059 387 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 GRIA1P42261 906 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 NPY2RP49146 381 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 CASP6P55212 293 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 BASP1P80723 227 aaKnown RBP18.54■□□□□ 0.56
APTX-229ENST00000489583 RBPJQ06330 500 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 C1QL3Q5VWW1 255 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 MTFR2Q6P444 385 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 C1orf54Q8WWF1 131 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 SMPDL3AQ92484 453 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 C8orf44Q96CB5 159 aa18.54■□□□□ 0.56
APTX-229ENST00000489583 MMABQ96EY8 250 aaPredicted RBP18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms