RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 IL17RELQ6ZVW7 336 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 ENOSF1Q7L5Y1 443 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 CATSPERDQ86XM0 798 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 LGI2Q8N0V4 545 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 KLHDC1Q8N7A1 406 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 TC2NQ8N9U0 490 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 PRSS33Q8NF86 280 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 TSPAN14Q8NG11 270 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 USP28Q96RU2 1077 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 UPF3AQ9H1J1 476 aaKnown RBP3.08□□□□□ -1.92
RFC4-213ENST00000489028 NOL11Q9H8H0 719 aaKnown RBP3.08□□□□□ -1.92
RFC4-213ENST00000489028 TRPV4Q9HBA0 871 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 RPS10P5Q9NQ39 176 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 SPHK2Q9NRA0 654 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 NRBP1Q9UHY1 535 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 SLC24A2Q9UI40 661 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 KLK13Q9UKR3 277 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 TRPV2Q9Y5S1 764 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 FAM169AQ9Y6X4 670 aa3.08□□□□□ -1.92
RFC4-213ENST00000489028 SNURFLB1AK76 121 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 IPO8O15397 1037 aaKnown RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 ACSL3O95573 720 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 STARD3NLO95772 234 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 SLC2A2P11168 524 aaPredicted RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 AZGP1P25311 298 aaKnown RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 LHX1P48742 406 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 CCR3P51677 355 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 ZNF75DP51815 510 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 IRX6P78412 446 aaPredicted RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 GUCY2DQ02846 1103 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 NFATC2Q13469 925 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 VEZF1Q14119 521 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 BECN1Q14457 450 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 TOMM20Q15388 145 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 ZNF74Q16587 644 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 TCTEX1D4Q5JR98 221 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 WLSQ5T9L3 541 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 LCN1P1Q5VSP4 162 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 ZNF343Q6P1L6 599 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 PAQR6Q6TCH4 344 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 G2E3Q7L622 706 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 PLPPR4Q7Z2D5 763 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 C11orf45Q8TAV5 145 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 FAM71F1Q96KD3 344 aaPredicted RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 C4orf45Q96LM5 186 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 FAM218AQ96MZ4 157 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 ZNF300Q96RE9 604 aaPredicted RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 NUDT16L1Q9BRJ7 211 aaKnown RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 PPANQ9NQ55 473 aaKnown RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.07□□□□□ -1.92
RFC4-213ENST00000489028 THEGQ9P2T0 379 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 DDX25Q9UHL0 483 aaKnown RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 TTLL3Q9Y4R7 772 aa3.07□□□□□ -1.92
RFC4-213ENST00000489028 COL5A2P05997 1499 aaPredicted RBP3.07□□□□□ -1.92
RFC4-213ENST00000489028 TRBV5-5A0A0J9YX44 114 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 MPTX1A8MV57 137 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 TDRD15B5MCY1 1934 aaKnown RBP3.06□□□□□ -1.92
RFC4-213ENST00000489028 CCL24O00175 119 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 EPHB6O15197 1021 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 SLCO2B1O94956 709 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 ADRB2P07550 413 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 TRIM49P0CI25 452 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 TRIM49CP0CI26 452 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 GP1BBP13224 206 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 SHC1P29353 583 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 MC5RP33032 325 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 KRT2P35908 639 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 VAMP7P51809 220 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 XGP55808 180 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 POLR2LP62875 67 aaKnown RBP3.06□□□□□ -1.92
RFC4-213ENST00000489028 NUCB1Q02818 461 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 CALCOCO2Q13137 446 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 CUL3Q13618 768 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 SNTB1Q13884 538 aaKnown RBP3.06□□□□□ -1.92
RFC4-213ENST00000489028 LETM2Q2VYF4 491 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 GPR33Q49SQ1 333 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 TAF1BQ53T94 588 aaPredicted RBP3.06□□□□□ -1.92
RFC4-213ENST00000489028 TCTE1Q5JU00 501 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 SPINK14Q6IE38 97 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 LEKR1Q6ZMV7 388 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 SPEM1Q8N4L4 309 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 AVL9Q8NBF6 648 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 OR4K1Q8NGD4 311 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 OR6S1Q8NH40 331 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 GTF3AQ92664 365 aaKnown RBP3.06□□□□□ -1.92
RFC4-213ENST00000489028 MOB3AQ96BX8 217 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 PRICKLE1Q96MT3 831 aaPredicted RBP3.06□□□□□ -1.92
RFC4-213ENST00000489028 MUS81Q96NY9 551 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 PASKQ96RG2 1323 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 CPNE1Q99829 537 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 LRRC61Q9BV99 259 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 SLC2A11Q9BYW1 496 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 WWTR1Q9GZV5 400 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 CLIC5Q9NZA1 410 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 NUDT4Q9NZJ9 180 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 STK26Q9P289 416 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 IL17BQ9UHF5 180 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 R4GN57 208 aa3.06□□□□□ -1.92
RFC4-213ENST00000489028 IGHV3OR16-10A0A075B7F0 116 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms