RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 ISCA2Q86U28 154 aa18.82■□□□□ 0.6
SEC22A-208ENST00000487572 ZFAND4Q86XD8 727 aa18.82■□□□□ 0.6
SEC22A-208ENST00000487572 PPP1R3BQ86XI6 285 aa18.82■□□□□ 0.6
SEC22A-208ENST00000487572 STAG3L4Q8TBR4 150 aa18.82■□□□□ 0.6
SEC22A-208ENST00000487572 NAF1Q96HR8 494 aaKnown RBP18.82■□□□□ 0.6
SEC22A-208ENST00000487572 TEFMQ96QE5 360 aaKnown RBP18.82■□□□□ 0.6
SEC22A-208ENST00000487572 PCMTD2Q9NV79 361 aa18.82■□□□□ 0.6
SEC22A-208ENST00000487572 WDR70Q9NW82 654 aa18.82■□□□□ 0.6
SEC22A-208ENST00000487572 SUPT3HB4E1H0 165 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 HCRTR1O43613 425 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 SUPT3HO75486 399 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 S100BP04271 92 aaPredicted RBP18.81■□□□□ 0.6
SEC22A-208ENST00000487572 FGF5P12034 268 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 KCNC1P48547 511 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 PRDX1Q06830 199 aaKnown RBP18.81■□□□□ 0.6
SEC22A-208ENST00000487572 IFFO1Q0D2I5 559 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 ADCK2Q7Z695 626 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 PLD6Q8N2A8 252 aaKnown RBP18.81■□□□□ 0.6
SEC22A-208ENST00000487572 OR56A3Q8NH54 315 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 OR1L3Q8NH93 324 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 ZNF501Q96CX3 271 aaPredicted RBP18.81■□□□□ 0.6
SEC22A-208ENST00000487572 ZPBPQ9BS86 351 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 SGPP1Q9BX95 441 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 ULBP3Q9BZM4 244 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 PCBD2Q9H0N5 130 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 ZNF358Q9NW07 568 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 CUEDC1Q9NWM3 386 aaPredicted RBP18.81■□□□□ 0.6
SEC22A-208ENST00000487572 IRAK4Q9NWZ3 460 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 WWOXQ9NZC7 414 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 SH2B3Q9UQQ2 575 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 RAXQ9Y2V3 346 aa18.81■□□□□ 0.6
SEC22A-208ENST00000487572 TLDC2A0PJX2 215 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 KERAO60938 352 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 RFPL1O75677 317 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 TIAF1O95411 115 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 CCND1P24385 295 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 HNMTP50135 292 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 ABATP80404 500 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 ACAP2Q15057 778 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 PTCHD3Q3KNS1 767 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 FBXO48Q5FWF7 155 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 TIFABQ6ZNK6 161 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 DNAJC22Q8N4W6 341 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 ZUFSPQ96AP4 578 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 RHBDF1Q96CC6 855 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 SCYL1Q96KG9 808 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 TSNARE1Q96NA8 513 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 DCBLD2Q96PD2 775 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 B3GNT4Q9C0J1 378 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 PPCSQ9HAB8 311 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 FRYQ5TBA9 3013 aa18.8■□□□□ 0.6
SEC22A-208ENST00000487572 IGKV1-8A0A0C4DH67 115 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 FOXO6A8MYZ6 492 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 TARM1B6A8C7 271 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 GOLGA8RI6L899 631 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 UBXN8O00124 270 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 STK17BO94768 372 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 KIAA0754O94854 1291 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 NUDT17P0C025 328 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 ZNF28P17035 718 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 NAA25Q14CX7 972 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.79■□□□□ 0.6
SEC22A-208ENST00000487572 PWWP2BQ6NUJ5 590 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 LCTLQ6UWM7 567 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 C17orf64Q86WR6 236 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 PROSER1Q86XN7 944 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 TMEM126BQ8IUX1 230 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 MCATQ8IVS2 390 aaKnown RBP18.79■□□□□ 0.6
SEC22A-208ENST00000487572 MREGQ8N565 214 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 KDF1Q8NAX2 398 aaPredicted RBP18.79■□□□□ 0.6
SEC22A-208ENST00000487572 SNIP1Q8TAD8 396 aaKnown RBP18.79■□□□□ 0.6
SEC22A-208ENST00000487572 CABS1Q96KC9 395 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 GPR78Q96P69 363 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 ATOH8Q96SQ7 321 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 CHRNA10Q9GZZ6 450 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 NUDT4Q9NZJ9 180 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 PLCL2Q9UPR0 1127 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 CHD8Q9HCK8 2581 aa18.79■□□□□ 0.6
SEC22A-208ENST00000487572 A0A0J9YVX5 310 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 H7BY64 318 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 TAF4O00268 1085 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 CTSVO60911 334 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 SCRG1O75711 98 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 WDR47O94967 919 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 MT-ND3P03897 115 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 CTSBP07858 339 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 CDH1P12830 882 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 NPPBP16860 134 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 KRT15P19012 456 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 GDF5P43026 501 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 GABRA4P48169 554 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 ITGA1P56199 1179 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 COL9A2Q14055 689 aaPredicted RBP18.78■□□□□ 0.6
SEC22A-208ENST00000487572 TSNAXIP1Q2TAA8 658 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 ZC3H12BQ5HYM0 836 aaKnown RBP18.78■□□□□ 0.6
SEC22A-208ENST00000487572 PRAMEF17Q5VTA0 474 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 SULT1C3Q6IMI6 304 aa18.78■□□□□ 0.6
SEC22A-208ENST00000487572 THOC6Q86W42 341 aaKnown RBP18.78■□□□□ 0.6
SEC22A-208ENST00000487572 BPHLQ86WA6 291 aaPredicted RBP18.78■□□□□ 0.6
SEC22A-208ENST00000487572 PAQR7Q86WK9 346 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms