RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 PSTKQ8IV42 348 aaKnown RBP11.08□□□□□ -0.64
TRIM56-204ENST00000487252 TMEM178AQ8NBL3 297 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 DDHD1Q8NEL9 900 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 OR52E1Q8NGJ3 308 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 MCEEQ96PE7 176 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 OSBPL9Q96SU4 736 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 OLFM1Q99784 485 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 ZCCHC2Q9C0B9 1178 aaKnown RBP11.08□□□□□ -0.64
TRIM56-204ENST00000487252 KLHL1Q9NR64 748 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 CUTCQ9NTM9 273 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 ADAM22Q9P0K1 906 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 RNF14Q9UBS8 474 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 SHOC2Q9UQ13 582 aa11.08□□□□□ -0.64
TRIM56-204ENST00000487252 A0A0A6YYK5 440 aaPredicted RBP11.07□□□□□ -0.64
TRIM56-204ENST00000487252 F8VZ95 297 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 CES2O00748 559 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 MCM3P25205 808 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 SOX5P35711 763 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 OR1C1Q15619 314 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 ACER2Q5QJU3 275 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 MEI1Q5TIA1 1274 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 SPINK14Q6IE38 97 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 GALNTL5Q7Z4T8 443 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 PAQR7Q86WK9 346 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 LRRC49Q8IUZ0 686 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 LIX1LQ8IVB5 337 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 BEST3Q8N1M1 668 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 GDAP1Q8TB36 358 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 FATE1Q969F0 183 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 MIEF2Q96C03 454 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 LINC00615Q96LM1 132 aaPredicted RBP11.07□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF285Q96NJ3 590 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 TRIB3Q96RU7 358 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 ADGRE3Q9BY15 652 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF700Q9H0M5 742 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF711Q9Y462 761 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 SVEP1Q4LDE5 3571 aa11.07□□□□□ -0.64
TRIM56-204ENST00000487252 A0A0J9YY10 115 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 FITM1A5D6W6 292 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 TRIM64A6NGJ6 449 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 TRIM64BA6NI03 449 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 DDX3XO00571 662 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRIM56-204ENST00000487252 NEURL1O76050 574 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 CALB1P05937 261 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 SP1P08047 785 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 RHOXF2BP0C7M4 288 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 CD46P15529 392 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 AMPD1P23109 780 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 PBLDP30039 288 aaPredicted RBP11.06□□□□□ -0.64
TRIM56-204ENST00000487252 ZFP36L2P47974 494 aaKnown RBP11.06□□□□□ -0.64
TRIM56-204ENST00000487252 VSNL1P62760 191 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 EEF1A2Q05639 463 aaKnown RBP11.06□□□□□ -0.64
TRIM56-204ENST00000487252 KRT33BQ14525 404 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 SLC25A35Q3KQZ1 300 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 KRTAP24-1Q3LI83 254 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 LDLRAP1Q5SW96 308 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 TIGD7Q6NT04 549 aaPredicted RBP11.06□□□□□ -0.64
TRIM56-204ENST00000487252 MON1BQ7L1V2 547 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 DTWD1Q8N5C7 304 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.06□□□□□ -0.64
TRIM56-204ENST00000487252 LILRA3Q8N6C8 439 aaPredicted RBP11.06□□□□□ -0.64
TRIM56-204ENST00000487252 PCDHB18PQ96TA0 734 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 PIP5K1AQ99755 562 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 RHOXF2Q9BQY4 288 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 CCM2Q9BSQ5 444 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 PACSIN1Q9BY11 444 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 XKR8Q9H6D3 395 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 IRAK4Q9NWZ3 460 aa11.06□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF282Q9UDV7 671 aaPredicted RBP11.06□□□□□ -0.64
TRIM56-204ENST00000487252 GRID2IPA4D2P6 1211 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 ANKRD62A6NC57 917 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 SYT5O00445 386 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 SGTAO43765 313 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 CCDC172P0C7W6 258 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 PIRTP0C851 137 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 BMP7P18075 431 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 CD86P42081 329 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 OCA2Q04671 838 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 TCEAL1Q15170 157 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 IFI16Q16666 785 aaKnown RBP11.05□□□□□ -0.64
TRIM56-204ENST00000487252 FNBP1LQ5T0N5 605 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 ALKBH5Q6P6C2 394 aaKnown RBP11.05□□□□□ -0.64
TRIM56-204ENST00000487252 KDELC1Q6UW63 502 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 POLNQ7Z5Q5 900 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 HOOK3Q86VS8 718 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 P3H2Q8IVL5 708 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 MCATQ8IVS2 390 aaKnown RBP11.05□□□□□ -0.64
TRIM56-204ENST00000487252 LRRC57Q8N9N7 239 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 FAM98AQ8NCA5 519 aaKnown RBP11.05□□□□□ -0.64
TRIM56-204ENST00000487252 CAPZA3Q96KX2 299 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 ZNF354BQ96LW1 612 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 FERD3LQ96RJ6 166 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 NPAS2Q99743 824 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 UTP23Q9BRU9 249 aaKnown RBP11.05□□□□□ -0.64
TRIM56-204ENST00000487252 SLC6A16Q9GZN6 736 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 MVB12BQ9H7P6 319 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 ZWILCHQ9H900 591 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 IL26Q9NPH9 171 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 SPHK1Q9NYA1 384 aa11.05□□□□□ -0.64
TRIM56-204ENST00000487252 PCSK1NQ9UHG2 260 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms