RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 CNTNAP1P78357 1384 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 OR6C70A6NIJ9 312 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 GTPBP1O00178 669 aaKnown RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 B4GALT5O43286 388 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 OR2B3O76000 313 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 UBXN7O94888 489 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 NUDT14O95848 222 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 ADH1CP00326 375 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 HOXC8P31273 242 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 ZNF132P52740 706 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TSPAN5P62079 268 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TRAM2Q15035 370 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 SEC23BQ15437 767 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 UGCGQ16739 394 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 PROX2Q3B8N5 592 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 KLHL26Q53HC5 615 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 COLEC12Q5KU26 742 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 RAET1GQ6H3X3 334 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 BLOC1S3Q6QNY0 202 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TMCO2Q7Z6W1 182 aaPredicted RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 LIX1Q8N485 282 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 C2CD4AQ8NCU7 369 aaPredicted RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 KAT2AQ92830 837 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 KCNN1Q92952 543 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 HEPHQ9BQS7 1158 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TMEM246Q9BRR3 403 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 B3GNT5Q9BYG0 378 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TM6SF2Q9BZW4 377 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 SMOC2Q9H3U7 446 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TAS2R10Q9NYW0 307 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 DEC1Q9P2X7 70 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 HEBP2Q9Y5Z4 205 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 PMF1-BGLAPU3KQ54 211 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 MEGF11A6BM72 1044 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 FAAHO00519 579 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TOR1BO14657 336 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 PCDHGA12O60330 932 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TSPAN1O60635 241 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 RNASEH2AO75792 299 aaKnown RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 GABBR2O75899 941 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 CMPK1P30085 196 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 MPIP34949 423 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 CDH11P55287 796 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 MAXP61244 160 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 RPP38P78345 283 aaKnown RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 NCBP2-AS2Q69YL0 99 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 PAQR3Q6TCH7 311 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 LRRN1Q6UXK5 716 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 NPAS3Q8IXF0 933 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 DDX1Q92499 740 aaKnown RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 ABCB9Q9NP78 766 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TVP23BQ9NYZ1 205 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 COLEC10Q9Y6Z7 277 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TRBC2A0A5B9 178 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 MID1O15344 667 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 LGR5O75473 907 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 SCGNO76038 276 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TSPAN8P19075 237 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 PVALBP20472 110 aaPredicted RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 ATP5A1P25705 553 aaKnown RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 EIF2DP41214 584 aaKnown RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 MAZP56270 477 aaKnown RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 RCAN2Q14206 197 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 GRHL2Q6ISB3 625 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 OTOP3Q7RTS5 596 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 SLC22A16Q86VW1 577 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 MARCH9Q86YJ5 346 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 HCAR2Q8TDS4 363 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 UPF1Q92900 1129 aaKnown RBP eCLIP6□□□□□ -1.45
PRPF4B-205ENST00000480058 RNF31Q96EP0 1072 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TMEM80Q96HE8 168 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 MYRFLQ96LU7 910 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 MCMBPQ9BTE3 642 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 COMMD3Q9UBI1 195 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 HTR3EA5X5Y0 456 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 NPEPPSL1A6NEC2 478 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 J3QRK9 145 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 PDHXO00330 501 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 FLRT2O43155 660 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 GMFGO60234 142 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 PIAS1O75925 651 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 NFATC1O95644 943 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TOP3BO95985 862 aaKnown RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 HLA-DQA2P01906 255 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 ADCYAP1R1P41586 468 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 ASPAP45381 313 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 OR3A3P47888 321 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 OR3A2P47893 321 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 DSC2Q02487 901 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 FGL1Q08830 312 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 TGFBIQ15582 683 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 ADGRF1Q5T601 910 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 CHST9Q7L1S5 443 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 CAND1Q86VP6 1230 aaKnown RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 SLC44A3Q8N4M1 653 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 ZNF433Q8N7K0 673 aaPredicted RBP6□□□□□ -1.45
PRPF4B-205ENST00000480058 AKAP1Q92667 903 aaKnown RBP eCLIP6□□□□□ -1.45
PRPF4B-205ENST00000480058 FBXL8Q96CD0 374 aa6□□□□□ -1.45
PRPF4B-205ENST00000480058 IL4I1Q96RQ9 567 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms