RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 NPDC1Q9NQX5 325 aaPredicted RBP16.46■□□□□ 0.23
HMGN1-212ENST00000479586 IMPACTQ9P2X3 320 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 FAM169AQ9Y6X4 670 aa16.46■□□□□ 0.23
HMGN1-212ENST00000479586 A0A0J9YVX5 310 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 E9PLN8 166 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 H7C0S8 307 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 SRPX2O60687 465 aaPredicted RBP16.45■□□□□ 0.22
HMGN1-212ENST00000479586 SLCO2B1O94956 709 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 MLYCDO95822 493 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 PSMB4P28070 264 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 PSMB5P28074 263 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 ZBED6P86452 979 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 DNAJC21Q5F1R6 531 aaKnown RBP16.45■□□□□ 0.22
HMGN1-212ENST00000479586 VRK3Q8IV63 474 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 SIAH3Q8IW03 269 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 DNAAF3Q8N9W5 541 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 MDS2Q8NDY4 140 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 OR2L8Q8NGY9 312 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 IMMP1LQ96LU5 166 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 FRMD6Q96NE9 622 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 VKORC1Q9BQB6 163 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 TRIM51Q9BSJ1 452 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 ANKRD10Q9NXR5 420 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 DDX56Q9NY93 547 aaKnown RBP16.45■□□□□ 0.22
HMGN1-212ENST00000479586 TEKT2Q9UIF3 430 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 LUC7L2Q9Y383 392 aaKnown RBP16.45■□□□□ 0.22
HMGN1-212ENST00000479586 HCFC1P51610 2035 aa16.45■□□□□ 0.22
HMGN1-212ENST00000479586 ASPDHA6ND91 283 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 A8MUI8 341 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 TARM1B6A8C7 271 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 ASNA1O43681 348 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 RBL1P28749 1068 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 AP2B1P63010 937 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 PPP2R2AP63151 447 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 TYRO3Q06418 890 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 TUBA3CQ13748 450 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 DSG2Q14126 1118 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 SPARCL1Q14515 664 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 MUM1Q2TAK8 710 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 TUBA3EQ6PEY2 450 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 CHDHQ8NE62 594 aaPredicted RBP16.44■□□□□ 0.22
HMGN1-212ENST00000479586 CFAP61Q8NHU2 1237 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 ZUFSPQ96AP4 578 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 MIPEPQ99797 713 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 FOXC2Q99958 501 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 C14orf105Q9NVL8 296 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 COQ3Q9NZJ6 369 aa16.44■□□□□ 0.22
HMGN1-212ENST00000479586 SCN2AQ99250 2005 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 RCCD1A6NED2 376 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 TMEM200CA6NKL6 621 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 HACD1B0YJ81 288 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 QSOX1O00391 747 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 TSPAN12O95859 305 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 TMEM253P0C7T8 217 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 ICAM2P13598 275 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 PLOD1Q02809 727 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-212ENST00000479586 FOXD4Q12950 439 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-212ENST00000479586 PRTGQ2VWP7 1150 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 ITPRIPL1Q6GPH6 555 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 TMEM205Q6UW68 189 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 PACS1Q6VY07 963 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 RNF44Q7L0R7 432 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 FGD2Q7Z6J4 655 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 DCUN1D3Q8IWE4 304 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 SLC22A15Q8IZD6 547 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 GHDCQ8N2G8 530 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 AMER3Q8N944 861 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 SCMH1Q96GD3 660 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 CABS1Q96KC9 395 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 TBL1YQ9BQ87 522 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 ZNF559Q9BR84 538 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 TUBB6Q9BUF5 446 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 CCM2LQ9NUG4 571 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-212ENST00000479586 NLE1Q9NVX2 485 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-212ENST00000479586 CAPN11Q9UMQ6 739 aa16.43■□□□□ 0.22
HMGN1-212ENST00000479586 AAR2Q9Y312 384 aaKnown RBP16.43■□□□□ 0.22
HMGN1-212ENST00000479586 NSD1Q96L73 2696 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-212ENST00000479586 IGHV3-20A0A0C4DH32 117 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 NKX2-6A6NCS4 301 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 OR51F1A6NGY5 319 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 RASGRF2O14827 1237 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 SEC24DO94855 1032 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-212ENST00000479586 SERPINC1P01008 464 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 ERVK-10P10266 1014 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 EEF1DP29692 281 aaKnown RBP16.42■□□□□ 0.22
HMGN1-212ENST00000479586 TFF3Q07654 80 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 ITIH4Q14624 930 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 OR1C1Q15619 314 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 SLC18A3Q16572 532 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 SYT16Q17RD7 645 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 ACER2Q5QJU3 275 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 CCDC50Q8IVM0 306 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 CDKN2AIPNLQ96HQ2 116 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 MKL2Q9ULH7 1088 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 ASB1Q9Y576 335 aa16.42■□□□□ 0.22
HMGN1-212ENST00000479586 hCG_1818297A0A087WSY0 165 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 KRT87PA6NCN2 255 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 FAM90A27PA6NNH2 459 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 FOXO6A8MYZ6 492 aa16.41■□□□□ 0.22
HMGN1-212ENST00000479586 H7C0C1 242 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms