RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ACSL6Q9UKU0 697 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 IKBKGQ9Y6K9 419 aa9.88□□□□□ -0.83
HDAC6-222ENST00000478095 APC2O95996 2303 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 A0A087WV48 116 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 NCF1BA6NI72 391 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 NCF1CA8MVU1 366 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 RAD1O60671 282 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 SCRG1O75711 98 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 ALDOAP04075 364 aaKnown RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 NTRK1P04629 796 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 ENO2P09104 434 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 NCF1P14598 390 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 CD82P27701 267 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 CRABP2P29373 138 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 CMPK1P30085 196 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 GCGRP47871 477 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 GABRA4P48169 554 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 SERPINB8P50452 374 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 DLG1Q12959 904 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 NAE1Q13564 534 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 OR4D1Q15615 310 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 ERCC6LQ2NKX8 1250 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 ZXDCQ2QGD7 858 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 C18orf21Q32NC0 220 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 PRAMEF13Q5VWM6 474 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 ICE2Q659A1 982 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 CYB5D1Q6P9G0 228 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 FIGLAQ6QHK4 219 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 C19orf48Q6RUI8 117 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 TIPARPQ7Z3E1 657 aaKnown RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 ADCK2Q7Z695 626 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 ADAMTSL2Q86TH1 951 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 TBC1D1Q86TI0 1168 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 DTX1Q86Y01 620 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 TMEM126BQ8IUX1 230 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 DNAJC22Q8N4W6 341 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 GALNT6Q8NCL4 622 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 DCAKDQ8WVC6 231 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 KCTD4Q8WVF5 259 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 HNRNPLLQ8WVV9 542 aaKnown RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 EXT2Q93063 718 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 PTERQ96BW5 349 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 PYCR2Q96C36 320 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 EGFL8Q99944 293 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 DPH7Q9BTV6 452 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 B3GNT4Q9C0J1 378 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 DERL2Q9GZP9 239 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 VPS11Q9H270 941 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 MRPS30Q9NP92 439 aaKnown RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 INTS7Q9NVH2 962 aaKnown RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 CUEDC1Q9NWM3 386 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-222ENST00000478095 IRAK4Q9NWZ3 460 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 PILRAQ9UKJ1 303 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 SH2B3Q9UQQ2 575 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 OARD1Q9Y530 152 aa9.87□□□□□ -0.83
HDAC6-222ENST00000478095 A0A096LPK6 155 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 IGKV1-8A0A0C4DH67 115 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 E7EQ34 232 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 CTSVO60911 334 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 CCNDBP1O95273 360 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 DLGAP3O95886 979 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 C2P06681 752 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 TFEBP19484 476 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 GCAP28676 217 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 TYK2P29597 1187 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 SERPINB9P50453 376 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 ITGA1P56199 1179 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 AP1S2P56377 157 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 ATP6V0D1P61421 351 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 TLE3Q04726 772 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 PRDX1Q06830 199 aaKnown RBP9.86□□□□□ -0.83
HDAC6-222ENST00000478095 TAF1BQ53T94 588 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-222ENST00000478095 FBXO48Q5FWF7 155 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 TAOK1Q7L7X3 1001 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 PLD3Q8IV08 490 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 CACNA2D3Q8IZS8 1091 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 NLGN4XQ8N0W4 816 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 IL22RA1Q8N6P7 574 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 NLGN4YQ8NFZ3 816 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-222ENST00000478095 ANKRD7Q92527 254 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 NKD1Q969G9 470 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 FBXL8Q96CD0 374 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 NXNL1Q96CM4 212 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 CRELD1Q96HD1 420 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 UBXN10Q96LJ8 280 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 SPRY4Q9C004 299 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 SPRTNQ9H040 489 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-222ENST00000478095 ALG9Q9H6U8 611 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 IGSF5Q9NSI5 407 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 STARD5Q9NSY2 213 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 EURLQ9NYK6 297 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 TLK1Q9UKI8 766 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 NOVA2Q9UNW9 492 aaKnown RBP9.86□□□□□ -0.83
HDAC6-222ENST00000478095 ACOT9Q9Y305 439 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 TMEM184BQ9Y519 407 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-222ENST00000478095 KIF26BQ2KJY2 2108 aa9.86□□□□□ -0.83
HDAC6-222ENST00000478095 A0A087X1B8 175 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 A0A0J9YVX5 310 aa9.85□□□□□ -0.83
HDAC6-222ENST00000478095 OR2A25A4D2G3 310 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms