RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 TMPRSS12Q86WS5 348 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 RDH11Q8TC12 318 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 SLC41A2Q96JW4 573 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 ATP6V1G3Q96LB4 118 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 TMEM74Q96NL1 305 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 FAM111AQ96PZ2 611 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 TRAPPC9Q96Q05 1148 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 DEPDC7Q96QD5 511 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 CD244Q9BZW8 370 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 ZNF768Q9H5H4 540 aaKnown RBP19.21■□□□□ 0.67
ACTB-210ENST00000477812 SLC22A14Q9Y267 594 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 ADAMTS20P59510 1910 aa19.21■□□□□ 0.67
ACTB-210ENST00000477812 SMIM24O75264 130 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 STK16O75716 305 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 WDR47O94967 919 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 SIX3O95343 332 aaPredicted RBP19.2■□□□□ 0.66
ACTB-210ENST00000477812 EPORP19235 508 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 ATP5F1P24539 256 aaPredicted RBP19.2■□□□□ 0.66
ACTB-210ENST00000477812 TSTA3Q13630 321 aaPredicted RBP19.2■□□□□ 0.66
ACTB-210ENST00000477812 C16orf72Q14CZ0 275 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 ZIC1Q15915 447 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 SNAP47Q5SQN1 464 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 CACHD1Q5VU97 1274 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 ZNF425Q6IV72 752 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 METTL2BQ6P1Q9 378 aaKnown RBP19.2■□□□□ 0.66
ACTB-210ENST00000477812 TMPRSS7Q7RTY8 843 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 LRRC70Q7Z2Q7 622 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 RCBTB1Q8NDN9 531 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 PHF21BQ96EK2 531 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 HAUS8Q9BT25 410 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 C1QTNF3Q9BXJ4 246 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 IQCGQ9H095 443 aaKnown RBP19.2■□□□□ 0.66
ACTB-210ENST00000477812 COPG2Q9UBF2 871 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 BTRCQ9Y297 605 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 KLHL20Q9Y2M5 609 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 PTPRBP23467 1997 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 KNTC1P50748 2209 aa19.2■□□□□ 0.66
ACTB-210ENST00000477812 SLC9B1P1A6NJY1 282 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 E2F3O00716 465 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 HGSO14964 777 aaPredicted RBP19.19■□□□□ 0.66
ACTB-210ENST00000477812 PRAMEF10O60809 474 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 RASSF9O75901 435 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 RPS17P08708 135 aaKnown RBP19.19■□□□□ 0.66
ACTB-210ENST00000477812 TAC1P20366 129 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 MAGP20916 626 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 CDH3P22223 829 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 KCNA4P22459 653 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 GRIA3P42263 894 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 PRKAA2P54646 552 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 ABATP80404 500 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 PCLAFQ15004 111 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 PHF19Q5T6S3 580 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 THEMIS2Q5TEJ8 643 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 KMT5CQ86Y97 462 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 ARMC2Q8NEN0 867 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 CHRNA10Q9GZZ6 450 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 KLHL25Q9H0H3 589 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 ABCF3Q9NUQ8 709 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 DNAJC11Q9NVH1 559 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 CUEDC1Q9NWM3 386 aaPredicted RBP19.19■□□□□ 0.66
ACTB-210ENST00000477812 WASF3Q9UPY6 502 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 CACNA1AO00555 2505 aa19.19■□□□□ 0.66
ACTB-210ENST00000477812 PCM1Q15154 2024 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 A0A1W2PNU3 283 aaPredicted RBP19.18■□□□□ 0.66
ACTB-210ENST00000477812 OR2A25A4D2G3 310 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 A8MU76 341 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 K7EPI3 171 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 ATP8B1O43520 1251 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 NRP2O60462 931 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 PRAMEF4O60810 478 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 CCNDBP1O95273 360 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 ZBTB11O95625 1053 aaPredicted RBP19.18■□□□□ 0.66
ACTB-210ENST00000477812 DHRS4L1P0CG22 281 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 MYL2P10916 166 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 CPA3P15088 417 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 NELFEP18615 380 aaKnown RBP19.18■□□□□ 0.66
ACTB-210ENST00000477812 EEF1DP29692 281 aaKnown RBP19.18■□□□□ 0.66
ACTB-210ENST00000477812 CMPK1P30085 196 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 SLC18A1P54219 525 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 HERVK_113P63132 956 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 PRAMEF9Q5VWM5 478 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 FCRL6Q6DN72 434 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 CHCHD4Q8N4Q1 142 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 C19orf47Q8N9M1 422 aaKnown RBP19.18■□□□□ 0.66
ACTB-210ENST00000477812 ABHD11Q8NFV4 315 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 NEIL2Q969S2 332 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 GRAMD1AQ96CP6 724 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 LIN37Q96GY3 246 aaPredicted RBP19.18■□□□□ 0.66
ACTB-210ENST00000477812 TMEM237Q96Q45 408 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 DPH7Q9BTV6 452 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 ERVK-6Q9BXR3 956 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 ACBD3Q9H3P7 528 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 MRPS30Q9NP92 439 aaKnown RBP19.18■□□□□ 0.66
ACTB-210ENST00000477812 SIDT1Q9NXL6 827 aaKnown RBP19.18■□□□□ 0.66
ACTB-210ENST00000477812 PCTPQ9UKL6 214 aa19.18■□□□□ 0.66
ACTB-210ENST00000477812 TNPO3Q9Y5L0 923 aaKnown RBP19.18■□□□□ 0.66
ACTB-210ENST00000477812 TMEM120BA0PK00 339 aa19.17■□□□□ 0.66
ACTB-210ENST00000477812 HMGB1P1B2RPK0 211 aaPredicted RBP19.17■□□□□ 0.66
ACTB-210ENST00000477812 TMX2-CTNND1H3BSU7 103 aa19.17■□□□□ 0.66
ACTB-210ENST00000477812 TM9SF1O15321 606 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms