RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 SPAG7O75391 227 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 EML2O95834 649 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 SYF2O95926 243 aaKnown RBP11.19□□□□□ -0.62
LSM2-212ENST00000477182 LTA4HP09960 611 aaKnown RBP11.19□□□□□ -0.62
LSM2-212ENST00000477182 SLC35G4P0C7Q5 338 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 ENO3P13929 434 aaPredicted RBP11.19□□□□□ -0.62
LSM2-212ENST00000477182 GPR3P46089 330 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 OR1D5P58170 312 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 MAGOHP61326 146 aaKnown RBP11.19□□□□□ -0.62
LSM2-212ENST00000477182 PLOD1Q02809 727 aaPredicted RBP11.19□□□□□ -0.62
LSM2-212ENST00000477182 SLC18A2Q05940 514 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 ABRQ12979 859 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 RPA4Q13156 261 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 NR1D2Q14995 579 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 ANKS6Q68DC2 871 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 CEACAM20Q6UY09 585 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 ZNF438Q7Z4V0 828 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 EXOC3L1Q86VI1 746 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 MYO1HQ8N1T3 1032 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 CFAP61Q8NHU2 1237 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 NXNL1Q96CM4 212 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 ATP6V1G3Q96LB4 118 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 UBXN10Q96LJ8 280 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 RMDN2Q96LZ7 410 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 C5orf34Q96MH7 638 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 SMC6Q96SB8 1091 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 SPRY4Q9C004 299 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 DERL2Q9GZP9 239 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 ZNF358Q9NW07 568 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 SENP1Q9P0U3 644 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 TAAR2Q9P1P5 351 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 TBC1D29Q9UFV1 150 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 IKZF3Q9UKT9 509 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 WDR37Q9Y2I8 494 aa11.19□□□□□ -0.62
LSM2-212ENST00000477182 NPEPPSL1A6NEC2 478 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 TCP11X1B4DZS4 312 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 EIF3FO00303 357 aaPredicted RBP11.18□□□□□ -0.62
LSM2-212ENST00000477182 CDC7O00311 574 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 COPEO14579 308 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 ZBTB14O43829 449 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 KLHL2O95198 593 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 MPC1LP0DKB6 136 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 THRAP10827 490 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 COL6A2P12110 1019 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 CD1DP15813 335 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 CD1CP29017 333 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 SLC26A3P40879 764 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 GLRBP48167 497 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 BIRC2Q13490 618 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 FAM83EQ2M2I3 478 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 ATP1A1-AS1Q5TC04 95 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 AGAP9Q5VTM2 703 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 CYHR1Q6ZMK1 362 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 NEK10Q6ZWH5 1172 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 BANPQ8N9N5 519 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 SPDYE1Q8NFV5 336 aaPredicted RBP11.18□□□□□ -0.62
LSM2-212ENST00000477182 MARVELD3Q96A59 401 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 PDLIM5Q96HC4 596 aaKnown RBP11.18□□□□□ -0.62
LSM2-212ENST00000477182 APOPT1Q96IL0 206 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 C12orf66Q96MD2 445 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 TSNARE1Q96NA8 513 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 RUBCNLQ9H714 662 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 NMRAL1Q9HBL8 299 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 ERRFI1Q9UJM3 462 aaPredicted RBP11.18□□□□□ -0.62
LSM2-212ENST00000477182 SLC5A6Q9Y289 635 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 TMEM184BQ9Y519 407 aaPredicted RBP11.18□□□□□ -0.62
LSM2-212ENST00000477182 CFAP20Q9Y6A4 193 aaKnown RBP11.18□□□□□ -0.62
LSM2-212ENST00000477182 PCM1Q15154 2024 aa11.18□□□□□ -0.62
LSM2-212ENST00000477182 PDZD2O15018 2839 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 NF1P21359 2839 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 TRBV23OR9-2A0A075B6M9 112 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 A6NCN8 305 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 HMGB1P1B2RPK0 211 aaPredicted RBP11.17□□□□□ -0.62
LSM2-212ENST00000477182 IFRD1O00458 451 aaPredicted RBP11.17□□□□□ -0.62
LSM2-212ENST00000477182 BTN3A1O00481 513 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 GLRA3O75311 464 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 GSTA1P08263 222 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 F3P13726 295 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 BRAFP15056 766 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 TFEBP19484 476 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 ACADLP28330 430 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 STAT5AP42229 794 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 HALP42357 657 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 ATP6V0D1P61421 351 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 MRPL49Q13405 166 aaKnown RBP11.17□□□□□ -0.62
LSM2-212ENST00000477182 SQSTM1Q13501 440 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 MAP7Q14244 749 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 OR4D1Q15615 310 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 TSNQ15631 228 aaKnown RBP11.17□□□□□ -0.62
LSM2-212ENST00000477182 INPP5JQ15735 1006 aaPredicted RBP11.17□□□□□ -0.62
LSM2-212ENST00000477182 TSNAXIP1Q2TAA8 658 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 HSP90B2PQ58FF3 399 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 LRRC8EQ6NSJ5 796 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 DUS1LQ6P1R4 473 aaKnown RBP11.17□□□□□ -0.62
LSM2-212ENST00000477182 ABRAXAS1Q6UWZ7 409 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 WASH2PQ6VEQ5 465 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 CDHR3Q6ZTQ4 885 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 APLFQ8IW19 511 aaPredicted RBP11.17□□□□□ -0.62
LSM2-212ENST00000477182 SFTPA2Q8IWL1 248 aa11.17□□□□□ -0.62
LSM2-212ENST00000477182 ESX1Q8N693 406 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms