RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 ELOVL6Q9H5J4 265 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 MVB12BQ9H7P6 319 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 SLC52A3Q9NQ40 469 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 GEMIN8Q9NWZ8 242 aaKnown RBP13.96□□□□□ -0.18
COL4A6-206ENST00000477085 SPATA7Q9P0W8 599 aa13.96□□□□□ -0.18
COL4A6-206ENST00000477085 SERTM1A2A2V5 107 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 GYG2O15488 501 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 RGS14O43566 566 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 C1GALT1C1LP0DN25 315 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 PKLRP30613 574 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 CYLC2Q14093 348 aaPredicted RBP13.95□□□□□ -0.18
COL4A6-206ENST00000477085 HERC3Q15034 1050 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 GSTA3Q16772 222 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 NXPE4Q6UWF7 544 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 LCTLQ6UWM7 567 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 LONP2Q86WA8 852 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 MFSD2AQ8NA29 543 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 ZNF740Q8NDX6 193 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 OR7G3Q8NG95 312 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 SLC5A11Q8WWX8 675 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 PATE1Q8WXA2 126 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 HSPA12BQ96MM6 686 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 BRINP2Q9C0B6 783 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 ACTL8Q9H568 366 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 PFDN4Q9NQP4 134 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 TAC3Q9UHF0 121 aa13.95□□□□□ -0.18
COL4A6-206ENST00000477085 CFAP73A6NFT4 308 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 FBP2O00757 339 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 MAP3K13O43283 966 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 PRICKLE3O43900 615 aaPredicted RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 RSL1D1O76021 490 aaKnown RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 ETHE1O95571 254 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 G6PDP11413 515 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 CDH1P12830 882 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 TDGF1P13385 188 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 SLC2A4P14672 509 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 IDO1P14902 403 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 ITGAXP20702 1163 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 CD38P28907 300 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 IL12AP29459 219 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 HSD17B2P37059 387 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 HNF4AP41235 474 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 MRPL19P49406 292 aaKnown RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 ACADVLP49748 655 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 RAB28P51157 221 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 UFM1P61960 85 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 SIGLEC14Q08ET2 396 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 C1orf61Q13536 156 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 KIF19Q2TAC6 998 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 USP39Q53GS9 565 aaKnown RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 THEMIS2Q5TEJ8 643 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 IL23RQ5VWK5 629 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 IYDQ6PHW0 289 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 FAM129CQ86XR2 697 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 MIER2Q8N344 545 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 SMPDL3AQ92484 453 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 PPP3R2Q96LZ3 170 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 MTERF1Q99551 399 aaKnown RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 RTKNQ9BST9 563 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 C1orf21Q9H246 121 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 TM9SF3Q9HD45 589 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 CUEDC1Q9NWM3 386 aaPredicted RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 DYRK1BQ9Y463 629 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 ANKRD28O15084 1053 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 F3P13726 295 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 CCND1P24385 295 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 PEBP1P30086 187 aaKnown RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 RACK1P63244 317 aaKnown RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 CUL3Q13618 768 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 SLBPQ14493 270 aaKnown RBP eCLIP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 KRT33BQ14525 404 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 PARGQ86W56 976 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 FAM20CQ8IXL6 584 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 PHACTR4Q8IZ21 702 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 OR2A1Q8NGT9 310 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 OR2L8Q8NGY9 312 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 EDAQ92838 391 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 RCN3Q96D15 328 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 APIPQ96GX9 242 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 MAGEB10Q96LZ2 347 aaPredicted RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 NPAS2Q99743 824 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 MIR1-1HGQ9H1L0 117 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 EHD1Q9H4M9 534 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 KIR3DX1Q9H7L2 352 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 LRTM1Q9HBL6 345 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 SPATA6Q9NWH7 488 aaPredicted RBP13.94□□□□□ -0.18
COL4A6-206ENST00000477085 SPHK1Q9NYA1 384 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 TAAR2Q9P1P5 351 aa13.94□□□□□ -0.18
COL4A6-206ENST00000477085 EML5Q05BV3 1969 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 IGKV1-8A0A0C4DH67 115 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 MAGEB17A8MXT2 336 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 NPIPB8E9PQR5 432 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 TLR4O00206 839 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 AIM2O14862 343 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 SEC22BO75396 215 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 PRPH2P23942 346 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 FNTBP49356 437 aa13.93□□□□□ -0.18
COL4A6-206ENST00000477085 RPL38P63173 70 aaKnown RBP13.93□□□□□ -0.18
COL4A6-206ENST00000477085 ILF3Q12906 894 aaKnown RBP eCLIP13.93□□□□□ -0.18
COL4A6-206ENST00000477085 IMPG1Q17R60 797 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms