RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 LSM7Q9UK45 103 aaKnown RBP4.86□□□□□ -1.63
CCDC39-204ENST00000476379 ASF1AQ9Y294 204 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 LCTP09848 1927 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 CACNA1DQ01668 2161 aa4.86□□□□□ -1.63
CCDC39-204ENST00000476379 FAM25AB3EWG3 89 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FAM25CB3EWG5 89 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FAM25GB3EWG6 89 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 H3BM21 787 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FRS3O43559 492 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ACSL4O60488 711 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 OTCP00480 354 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 C1QAP02745 245 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 MT-ND2P03891 347 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ANXA4P09525 319 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 APEHP13798 732 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RRM2P31350 389 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ARCN1P48444 511 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CENPAP49450 140 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TTPAP49638 278 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SNRPD2P62316 118 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 MC1RQ01726 317 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ID2Q02363 134 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RUNX1T1Q06455 604 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 DLX2Q07687 328 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 HYAL2Q12891 473 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 LRP8Q14114 963 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 DAG1Q14118 895 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TBC1D25Q3MII6 688 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TTLL9Q3SXZ7 439 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TMEM31Q5JXX7 168 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RAET1GQ6H3X3 334 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 DENND5AQ6IQ26 1287 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 MSANTD2Q6P1R3 559 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 RANBP10Q6VN20 620 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CYP2U1Q7Z449 544 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF605Q86T29 641 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 P2RY8Q86VZ1 359 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CROCCP3Q8IVE0 287 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TBC1D21Q8IYX1 336 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 MARVELD2Q8N4S9 558 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 C1orf52Q8N6N3 182 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FBXO22Q8NEZ5 403 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 OR4A15Q8NGL6 344 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 PHF10Q8WUB8 498 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FUBP1Q96AE4 644 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SLCO4A1Q96BD0 722 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TBC1D17Q9HA65 648 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 KLHL3Q9UH77 587 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 DLGAP4Q9Y2H0 992 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 NCOR2Q9Y618 2525 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 A0A1W2PP18 115 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 EFCAB10A6NFE3 127 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 AIREO43918 545 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SOX30O94993 753 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 MLYCDO95822 493 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 GALTP07902 379 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 IL12AP29459 219 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CAV3P56539 151 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 HOXC5Q00444 222 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ZMYND11Q15326 602 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 KLHL12Q53G59 568 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TMEM240Q5SV17 173 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 UBE2UQ5VVX9 321 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 STEAP4Q687X5 459 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 EPHX4Q8IUS5 362 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 NKAPQ8N5F7 415 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TMEM102Q8N9M5 508 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 OR9Q2Q8NGE9 314 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 WDR48Q8TAF3 677 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 APBB2Q92870 758 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TCEAL4Q96EI5 215 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 COX4I2Q96KJ9 171 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TTYH2Q9BSA4 534 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 PRR14Q9BWN1 585 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SMOC2Q9H3U7 446 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 EIF2B3Q9NR50 452 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 IMP3Q9NV31 184 aaKnown RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 GIN1Q9NXP7 522 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CLDND1Q9NY35 253 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 COMMD3Q9UBI1 195 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SLC25A13Q9UJS0 675 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TBX21Q9UL17 535 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 PHF24Q9UPV7 400 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 USP3Q9Y6I4 520 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 COL4A6Q14031 1691 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FRYQ5TBA9 3013 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 APC2O95996 2303 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 LOC100130705A0A1B0GUX0 176 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 HNRNPCL2B2RXH8 293 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 LOC110117498-PIK3R3F6TDL0 507 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TEX46H3BTG2 121 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 J3KTA2 159 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SOX1O00570 391 aaPredicted RBP4.85□□□□□ -1.63
CCDC39-204ENST00000476379 SLC7A4O43246 635 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 COCHO43405 550 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 ASNA1O43681 348 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 NPHS1O60500 1241 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 TMCC2O75069 709 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 CCNKO75909 580 aa4.85□□□□□ -1.63
CCDC39-204ENST00000476379 FGF18O76093 207 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms