RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CD70P32970 193 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 S100A3P33764 101 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 RYKP34925 604 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 TGFBR1P36897 503 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SPAM1P38567 509 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 TM4SF4P48230 202 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 CRYBA2P53672 197 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 LSM3P62310 102 aaKnown RBP10.63□□□□□ -0.71
C9orf3-214ENST00000473778 IL5RAQ01344 420 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 HSPA14Q0VDF9 509 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ITGADQ13349 1161 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 PTCHD3Q3KNS1 767 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 LRRC66Q68CR7 880 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SHQ1Q6PI26 577 aaKnown RBP10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SERPINA13PQ6UXR4 307 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 Q6ZNB5 142 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ANKRD13BQ86YJ7 626 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 CHCHD4Q8N4Q1 142 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 PIK3C3Q8NEB9 887 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 OR7A2PQ8NGA2 310 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 MCOLN3Q8TDD5 553 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 NRBF2Q96F24 287 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SH3YL1Q96HL8 342 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SCLYQ96I15 445 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 REXO5Q96IC2 774 aaKnown RBP10.63□□□□□ -0.71
C9orf3-214ENST00000473778 APOLD1Q96LR9 279 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 CCDC138Q96M89 665 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SH3GL1Q99961 368 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 HEPHQ9BQS7 1158 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 NEURL2Q9BR09 285 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 BTBD2Q9BX70 525 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 TRIT1Q9H3H1 467 aaKnown RBP10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SLC32A1Q9H598 525 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SIRT5Q9NXA8 310 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 PCDHGA10Q9Y5H3 936 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SOBPA7XYQ1 873 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SCN2BO60939 215 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 NDUFS2O75306 463 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 MTX2O75431 263 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ANGPTL1O95841 491 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ANXA5P08758 320 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 CD22P20273 847 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 S100A1P23297 94 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ITPKAP23677 461 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 IGFBP5P24593 272 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 AOAHP28039 575 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 BCAP31P51572 246 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 WNT3P56703 355 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SLC35A2P78381 396 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 PTSQ03393 145 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 FPGSQ05932 587 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 EPS8Q12929 822 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ADNP2Q6IQ32 1131 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 DNAJB7Q7Z6W7 309 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-214ENST00000473778 ZFP90Q8TF47 636 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 CEP295NLQ96MC4 621 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 P2RY13Q9BPV8 354 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 RIBC2Q9H4K1 309 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 SLC22A14Q9Y267 594 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 BTBD3Q9Y2F9 522 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 GPC6Q9Y625 555 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-214ENST00000473778 CPQQ9Y646 472 aa10.63□□□□□ -0.71
C9orf3-214ENST00000473778 COL4A6Q14031 1691 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 C16orf96A6NNT2 1141 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 CFAP99D6REC4 459 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 RFXANKO14593 260 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 WNT9AO14904 365 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 BNIP3LO60238 219 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 KRT6AP02538 564 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 KRT6BP04259 564 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 SEMG1P04279 462 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 KRT6CP48668 564 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 IL1RL1Q01638 556 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 LMAN2Q12907 356 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 GTF2H3Q13889 308 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 UGT8Q16880 541 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 KDM4DQ6B0I6 523 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 UBE2R2Q712K3 238 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 GPR155Q7Z3F1 870 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 PTOV1Q86YD1 416 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 GALNT13Q8IUC8 556 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 CLECL1Q8IZS7 167 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 HJURPQ8NCD3 748 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 AUTS2Q8WXX7 1259 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF566Q969W8 418 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 TESCQ96BS2 214 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 MAGED4Q96JG8 741 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 SLC29A3Q9BZD2 475 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 REXO4Q9GZR2 422 aaKnown RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 PCDH12Q9NPG4 1184 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 IL1RAPQ9NPH3 570 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 PRDM8Q9NQV8 689 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 AASDHPPTQ9NRN7 309 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 PCDH10Q9P2E7 1040 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 CD84Q9UIB8 345 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 MICAL3Q7RTP6 2002 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 A0A1W2PQ67 120 aa10.62□□□□□ -0.71
C9orf3-214ENST00000473778 ZNF99A8MXY4 864 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-214ENST00000473778 M0QX08 132 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms