RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 SEPT1Q8WYJ6 367 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 TMEM190Q8WZ59 177 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 GIMAP5Q96F15 307 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 INTS14Q96SY0 518 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 MAP3K3Q99759 626 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 ACTL8Q9H568 366 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 GRPEL1Q9HAV7 217 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 FAM207AQ9NSI2 230 aaPredicted RBP3.45□□□□□ -1.86
PTCD3-209ENST00000472044 P4HTMQ9NXG6 502 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 GRID1Q9ULK0 1009 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 KCNJ14Q9UNX9 436 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 C2CD2Q9Y426 696 aa3.45□□□□□ -1.86
PTCD3-209ENST00000472044 A0A1W2PPW3 197 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 ERVV-2B6SEH9 535 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 PRR23D1E9PI22 279 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-209ENST00000472044 FAM86B1E9PN63 330 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 PSMA7O14818 248 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 KLF11O14901 512 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 GLRA3O75311 464 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 KRT33AO76009 404 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 EML2O95834 649 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 SP1P08047 785 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 FAM86B2P0C5J1 330 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 PRSS56P0CW18 603 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 PRR23D2P0DMB1 279 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-209ENST00000472044 WNT5AP41221 380 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 GSDMDP57764 484 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 PTENP60484 403 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 RASGEF1BQ0VAM2 473 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 HERC3Q15034 1050 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 TEAD2Q15562 447 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 CTU2Q2VPK5 515 aaKnown RBP3.44□□□□□ -1.86
PTCD3-209ENST00000472044 LRRC73Q5JTD7 316 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 SLC16A9Q7RTY1 509 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 ANKRD33Q7Z3H0 272 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 SIX6OS1Q8N1H7 587 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 ZNF843Q8N446 348 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 CNBD1Q8NA66 436 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 DNASE1L2Q92874 299 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 P2RX5Q93086 422 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 SHARPINQ9H0F6 387 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 CHST11Q9NPF2 352 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 MRGBPQ9NV56 204 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 INTS9Q9NV88 658 aaKnown RBP3.44□□□□□ -1.86
PTCD3-209ENST00000472044 ARGLU1Q9NWB6 273 aaPredicted RBP3.44□□□□□ -1.86
PTCD3-209ENST00000472044 DNAJB9Q9UBS3 223 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 RASAL2Q9UJF2 1139 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 MAN1B1Q9UKM7 699 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 NOL7Q9UMY1 257 aaKnown RBP3.44□□□□□ -1.86
PTCD3-209ENST00000472044 IL16Q14005 1332 aa3.44□□□□□ -1.86
PTCD3-209ENST00000472044 DISP3Q9P2K9 1392 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 SLC7A4O43246 635 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 STX6O43752 255 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 FCGR3BO75015 233 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 KHDRBS3O75525 346 aaKnown RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 CDK2AP2O75956 126 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 AP2A2O94973 939 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 PGLSO95336 258 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 PAK4O96013 591 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 NGFP01138 241 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 C9P02748 559 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 GPIP06744 558 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 CD48P09326 243 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 PATE4P0C8F1 98 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 FAM157CP0CG43 387 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 EPORP19235 508 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 CD27P26842 260 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 PRKCIP41743 596 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 KCNJ10P78508 379 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 CACNG1Q06432 222 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 TRAP1Q12931 704 aaKnown RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 TAZQ16635 292 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 MEP1BQ16820 701 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 KRTAP24-1Q3LI83 254 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 LYSMD4Q5XG99 296 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 FAM53AQ6NSI3 398 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 UGT3A1Q6NUS8 523 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 ZNF449Q6P9G9 518 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 SHQ1Q6PI26 577 aaKnown RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 TMEM182Q6ZP80 229 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 G2E3Q7L622 706 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 PHLDB2Q86SQ0 1253 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 AMIGO1Q86WK6 493 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 DZIP1Q86YF9 867 aaKnown RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 C4orf19Q8IY42 314 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 KIRREL3Q8IZU9 778 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 DNASE2BQ8WZ79 361 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 DYRK2Q92630 601 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 ZNF501Q96CX3 271 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 PGM2Q96G03 612 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 CCDC114Q96M63 670 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 JAKMIP1Q96N16 626 aaKnown RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 F2RL3Q96RI0 385 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 SLC52A3Q9NQ40 469 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 ZNF71Q9NQZ8 489 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 ERAP1Q9NZ08 941 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 LEF1Q9UJU2 399 aaPredicted RBP3.43□□□□□ -1.86
PTCD3-209ENST00000472044 CDH7Q9ULB5 785 aa3.43□□□□□ -1.86
PTCD3-209ENST00000472044 OOEPA6NGQ2 149 aa3.42□□□□□ -1.86
PTCD3-209ENST00000472044 MSGN1A6NI15 193 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms