RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 KLK2P20151 261 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 DSG2Q14126 1118 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 GRB7Q14451 532 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 ITIH4Q14624 930 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 TMEM205Q6UW68 189 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 C3P1Q6ZMU1 363 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 SIAH3Q8IW03 269 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 OR4N4Q8N0Y3 316 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 EID3Q8N140 333 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 HAUS1Q96CS2 278 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 BPIFA3Q9BQP9 254 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 TUBB6Q9BUF5 446 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 YIPF2Q9BWQ6 316 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 ARNT2Q9HBZ2 717 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 NLE1Q9NVX2 485 aaPredicted RBP18.04■□□□□ 0.48
SORT1-203ENST00000471996 PPT2Q9UMR5 302 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 CDC14AQ9UNH5 594 aa18.04■□□□□ 0.48
SORT1-203ENST00000471996 A0A0J9YVX5 310 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 RCCD1A6NED2 376 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 A8MUI8 341 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 FFAR3O14843 346 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 GPR42O15529 346 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 ZNHIT1O43257 154 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 TSPAN12O95859 305 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 RPN2P04844 631 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 EIF2S1P05198 315 aaKnown RBP18.03■□□□□ 0.48
SORT1-203ENST00000471996 RBL1P28749 1068 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 SLC18A3Q16572 532 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 PACS1Q6VY07 963 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 DCUN1D3Q8IWE4 304 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 CHERPQ8IWX8 916 aaKnown RBP18.03■□□□□ 0.48
SORT1-203ENST00000471996 SLC22A15Q8IZD6 547 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 BEST3Q8N1M1 668 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 GHDCQ8N2G8 530 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 MDS2Q8NDY4 140 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 SCMH1Q96GD3 660 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 CDKN2AIPNLQ96HQ2 116 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 FRMD6Q96NE9 622 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 SIGLEC12Q96PQ1 595 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 TRIM51Q9BSJ1 452 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 HES7Q9BYE0 225 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 TGIF2Q9GZN2 237 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 C10orf88Q9H8K7 445 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 KLHL1Q9NR64 748 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 IMPACTQ9P2X3 320 aa18.03■□□□□ 0.48
SORT1-203ENST00000471996 FEZ2Q9UHY8 353 aaPredicted RBP18.03■□□□□ 0.48
SORT1-203ENST00000471996 PRRG2O14669 202 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 RASGRF2O14827 1237 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 PRPF4O43172 522 aaKnown RBP eCLIP18.02■□□□□ 0.48
SORT1-203ENST00000471996 SERPINC1P01008 464 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 OR56A5P0C7T3 313 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 PSMB4P28070 264 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 EEF1DP29692 281 aaKnown RBP18.02■□□□□ 0.48
SORT1-203ENST00000471996 SLC1A1P43005 524 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 EMP3P54852 163 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 CSE1LP55060 971 aaKnown RBP18.02■□□□□ 0.48
SORT1-203ENST00000471996 PPP2R2AP63151 447 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 TYRO3Q06418 890 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 TUBA3CQ13748 450 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 PRPSAP1Q14558 356 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 TUBA3EQ6PEY2 450 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 RNF44Q7L0R7 432 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 TMEM200AQ86VY9 491 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 NRGNQ92686 78 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 MVB12AQ96EY5 273 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 CABS1Q96KC9 395 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 ZNF354BQ96LW1 612 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 TBL1YQ9BQ87 522 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 ZNF559Q9BR84 538 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 GSX1Q9H4S2 264 aaPredicted RBP18.02■□□□□ 0.48
SORT1-203ENST00000471996 MKKSQ9NPJ1 570 aaPredicted RBP18.02■□□□□ 0.48
SORT1-203ENST00000471996 NPDC1Q9NQX5 325 aaPredicted RBP18.02■□□□□ 0.48
SORT1-203ENST00000471996 SLC39A10Q9ULF5 831 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 LUC7L2Q9Y383 392 aaKnown RBP18.02■□□□□ 0.48
SORT1-203ENST00000471996 HYOU1Q9Y4L1 999 aa18.02■□□□□ 0.48
SORT1-203ENST00000471996 TMEM200CA6NKL6 621 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 NRP2O60462 931 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 SLCO2B1O94956 709 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 ERVK-10P10266 1014 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 SLC26A3P40879 764 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 HSF1Q00613 529 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 PRTGQ2VWP7 1150 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 ACER2Q5QJU3 275 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 VRK3Q8IV63 474 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 DMRTC2Q8IXT2 367 aaPredicted RBP18.01■□□□□ 0.47
SORT1-203ENST00000471996 AMER3Q8N944 861 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 CFAP61Q8NHU2 1237 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 ASB1Q9Y576 335 aa18.01■□□□□ 0.47
SORT1-203ENST00000471996 PRRC2AP48634 2157 aaKnown RBP18.01■□□□□ 0.47
SORT1-203ENST00000471996 CD46P15529 392 aa18■□□□□ 0.47
SORT1-203ENST00000471996 CD96P40200 585 aa18■□□□□ 0.47
SORT1-203ENST00000471996 EFNA3P52797 238 aa18■□□□□ 0.47
SORT1-203ENST00000471996 TFF3Q07654 80 aa18■□□□□ 0.47
SORT1-203ENST00000471996 SPARCL1Q14515 664 aa18■□□□□ 0.47
SORT1-203ENST00000471996 OR1C1Q15619 314 aa18■□□□□ 0.47
SORT1-203ENST00000471996 ANKRD20A2Q5SQ80 823 aa18■□□□□ 0.47
SORT1-203ENST00000471996 ANKRD20A1Q5TYW2 823 aa18■□□□□ 0.47
SORT1-203ENST00000471996 ANKRD20A3Q5VUR7 823 aa18■□□□□ 0.47
SORT1-203ENST00000471996 SPINK14Q6IE38 97 aa18■□□□□ 0.47
SORT1-203ENST00000471996 H3F3CQ6NXT2 135 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms