RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 WASH2PQ6VEQ5 465 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 RNF165Q6ZSG1 346 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 ARMCX6Q7L4S7 300 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 VN1R5Q7Z5H4 357 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 TMPRSS11BQ86T26 416 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 SNX32Q86XE0 403 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 KIRREL3Q8IZU9 778 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 KLHL29Q96CT2 875 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 WDR34Q96EX3 536 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 KLHDC7BQ96G42 594 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 FRG2BQ96QU4 278 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 MTERF1Q99551 399 aaKnown RBP8.04□□□□□ -1.12
GTF3A-206ENST00000470606 TBC1D10AQ9BXI6 508 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 CADM1Q9BY67 442 aaKnown RBP8.04□□□□□ -1.12
GTF3A-206ENST00000470606 SLC29A3Q9BZD2 475 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 TM9SF3Q9HD45 589 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 WASH6PQ9NQA3 447 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 TXLNGQ9NUQ3 528 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 SPHK1Q9NYA1 384 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 TAC3Q9UHF0 121 aa8.04□□□□□ -1.12
GTF3A-206ENST00000470606 UNC13CQ8NB66 2214 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PABPN1LA6NDY0 278 aaKnown RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 B2RBV5 119 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 UGDHO60701 494 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 GPR37L1O60883 481 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 CDH1P12830 882 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 F3P13726 295 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 HOXB3P14651 431 aaPredicted RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 GNAZP19086 355 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 CD38P28907 300 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PTPN4P29074 926 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PKLRP30613 574 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 CSNK1EP49674 416 aaKnown RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SLC25A3Q00325 362 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 ARHGAP19Q14CB8 494 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SF1Q15637 639 aaKnown RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 AP5B1Q2VPB7 878 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 LIPJQ5W064 366 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 GRHL2Q6ISB3 625 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 IYDQ6PHW0 289 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 FAM129CQ86XR2 697 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PHACTR4Q8IZ21 702 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 NAGSQ8N159 534 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 MFSD2AQ8NA29 543 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 OR7G3Q8NG95 312 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 OR2A1Q8NGT9 310 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PROKR1Q8TCW9 393 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 DNASE2BQ8WZ79 361 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 C11orf24Q96F05 449 aaPredicted RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 LRRC61Q9BV99 259 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 TWSG1Q9GZX9 223 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 MIR1-1HGQ9H1L0 117 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 ACTR5Q9H9F9 607 aaPredicted RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 CCDC177Q9NQR7 707 aaPredicted RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PRMT8Q9NR22 394 aaPredicted RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 AIG1Q9NVV5 245 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 CCDC167Q9P0B6 97 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 TAAR2Q9P1P5 351 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 DLGAP4Q9Y2H0 992 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 STK38LQ9Y2H1 464 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 KCNE2Q9Y6J6 123 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 ADAMTS9Q9P2N4 1935 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PIPSLA2A3N6 862 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 MAGEB17A8MXT2 336 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 H0YIV9 168 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PSMD12O00232 456 aaPredicted RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SH3BGRLO75368 114 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 CHEK2O96017 543 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 TNFP01375 233 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 G6PDP11413 515 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 TACR1P25103 407 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 HOXA6P31267 233 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 NUDT1P36639 197 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 RAB28P51157 221 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 UFM1P61960 85 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 ERVK-8P63133 956 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 RACK1P63244 317 aaKnown RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SLBPQ14493 270 aaKnown RBP eCLIP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SQLEQ14534 574 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PTGR1Q14914 329 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 NR6A1Q15406 480 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 TBCCQ15814 346 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 AGKQ53H12 422 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PRAMEF13Q5VWM6 474 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 ATG9BQ674R7 924 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 NXPE4Q6UWF7 544 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 LCTLQ6UWM7 567 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 EFL1Q7Z2Z2 1120 aaKnown RBP8.03□□□□□ -1.12
GTF3A-206ENST00000470606 RETREG3Q86VR2 466 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 PARGQ86W56 976 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 TMEM105Q8N8V8 129 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 FNDC5Q8NAU1 212 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 HUS1BQ8NHY5 278 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 FLVCR1-AS1Q8TAF5 88 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 MAGEC3Q8TD91 643 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SLC5A11Q8WWX8 675 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 SELENOMQ8WWX9 145 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 NELL1Q92832 810 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 APIPQ96GX9 242 aa8.03□□□□□ -1.12
GTF3A-206ENST00000470606 BTBD10Q9BSF8 475 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms