RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 TRPV3Q8NET8 790 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 OR7A2PQ8NGA2 310 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 TIFAQ96CG3 184 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CEP295NLQ96MC4 621 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 DPH2Q9BQC3 489 aaPredicted RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ADI1Q9BV57 179 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 TRIM15Q9C019 465 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 GIN1Q9NXP7 522 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 PLAGL1Q9UM63 463 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 AREL1O15033 823 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 PRKD3O94806 890 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 KCNH1O95259 989 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 LDLRP01130 860 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 FGBP02675 491 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 HSD17B1P14061 328 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CD300CQ08708 224 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 SLC14A1Q13336 389 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 NKG7Q16617 165 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 MACC1Q6ZN28 852 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 EFL1Q7Z2Z2 1120 aaKnown RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 LSRQ86X29 649 aaPredicted RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CHERPQ8IWX8 916 aaKnown RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 PARP8Q8N3A8 854 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CHCHD4Q8N4Q1 142 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 SGCDQ92629 289 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 AP2M1Q96CW1 435 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 RMND5BQ96G75 393 aaPredicted RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 MYOCQ99972 504 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 TRIM54Q9BYV2 358 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 BRINP2Q9C0B6 783 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ATAD3AQ9NVI7 634 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ERVW-1Q9UQF0 538 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 HS3ST2Q9Y278 367 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 RBMX2Q9Y388 322 aaKnown RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 E7EQ34 232 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ANKRD28O15084 1053 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ELFN1P0C7U0 828 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 PTPN2P17706 415 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 NR4A1P22736 598 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 MAPK1P28482 360 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 POLR2IP36954 125 aaKnown RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 NEDD8Q15843 81 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 GPR33Q49SQ1 333 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 TMEM220Q6QAJ8 160 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 HACD2Q6Y1H2 254 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ZNF621Q6ZSS3 439 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CYP2U1Q7Z449 544 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CFAP206Q8IYR0 622 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CLECL1Q8IZS7 167 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 MRPL43Q8N983 215 aaKnown RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 PRR7Q8TB68 274 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CHPT1Q8WUD6 406 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 GTF2H4Q92759 462 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 NXPE3Q969Y0 559 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CLIP3Q96DZ5 547 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ZNF597Q96LX8 424 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 PPP3R2Q96LZ3 170 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ZNF583Q96ND8 569 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 C1QTNF3Q9BXJ4 246 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 EMILIN2Q9BXX0 1053 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 IGFLR1Q9H665 355 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 AGPAT4Q9NRZ5 378 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 OLAHQ9NV23 265 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ZIM2Q9NZV7 527 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 EBF1Q9UH73 591 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 PCDHB14Q9Y5E9 798 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 NOX1Q9Y5S8 564 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 DLGAP1O14490 977 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 KRT6AP02538 564 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 STATHP02808 62 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 KRT6BP04259 564 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 TIMP2P16035 220 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 MAP4P27816 1152 aaKnown RBP9.15□□□□□ -0.94
TOP3A-203ENST00000469739 ELK4P28324 431 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 MTHFRP42898 656 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 PSMD8P48556 350 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 KRT6CP48668 564 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 GTF2H3Q13889 308 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 NHSL2Q5HYW2 709 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 LCN8Q6JVE9 175 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 PRMT9Q6P2P2 845 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 SPESP1Q6UW49 350 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 CLVS1Q8IUQ0 354 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-203ENST00000469739 SYTL1Q8IYJ3 562 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 CACTIN-AS1Q8N1I8 211 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 KLK6Q92876 244 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 ISOC1Q96CN7 298 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 CENPNQ96H22 339 aaPredicted RBP9.15□□□□□ -0.94
TOP3A-203ENST00000469739 IL17FQ96PD4 163 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 OR2AG1Q9H205 316 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 ADNPQ9H2P0 1102 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 SLC32A1Q9H598 525 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 C1orf109Q9NX04 203 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 CCL27Q9Y4X3 112 aa9.15□□□□□ -0.94
TOP3A-203ENST00000469739 TRBV5-4A0A0C4DH59 114 aa9.15□□□□□ -0.95
TOP3A-203ENST00000469739 C16orf96A6NNT2 1141 aa9.15□□□□□ -0.95
TOP3A-203ENST00000469739 PIP5K1CO60331 668 aa9.15□□□□□ -0.95
TOP3A-203ENST00000469739 MAN1A2O60476 641 aa9.15□□□□□ -0.95
TOP3A-203ENST00000469739 MMP20O60882 483 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms