RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 C18orf21Q32NC0 220 aaPredicted RBP14.66□□□□□ -0.06
SNIP1-202ENST00000468040 CDCP2Q5VXM1 449 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 C17orf64Q86WR6 236 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 KMT5CQ86Y97 462 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 SLITRK4Q8IW52 837 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 SREK1Q8WXA9 508 aaKnown RBP14.66□□□□□ -0.06
SNIP1-202ENST00000468040 OR4K3Q96R72 315 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 MAP3K3Q99759 626 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 SELENOSQ9BQE4 189 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 C1QTNF3Q9BXJ4 246 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 ERVK-6Q9BXR3 956 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 MRPS30Q9NP92 439 aaKnown RBP14.66□□□□□ -0.06
SNIP1-202ENST00000468040 DNAJC11Q9NVH1 559 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 GPRC5BQ9NZH0 403 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 TMEM9Q9P0T7 183 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 ANKMY1Q9P2S6 941 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 KLHL3Q9UH77 587 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 DYRK1BQ9Y463 629 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 ANGPTL3Q9Y5C1 460 aa14.66□□□□□ -0.06
SNIP1-202ENST00000468040 IGHV5-10-1A0A0J9YXX1 117 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 DCDC2BA2VCK2 349 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 E2F3O00716 465 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 MAP3K7O43318 606 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 KATNA1O75449 491 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 SIX3O95343 332 aaPredicted RBP14.65□□□□□ -0.06
SNIP1-202ENST00000468040 EPB42P16452 691 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 GNAZP19086 355 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 IMPDH1P20839 514 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 MPSTP25325 297 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 EEF1DP29692 281 aaKnown RBP14.65□□□□□ -0.06
SNIP1-202ENST00000468040 CCKBRP32239 447 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 HPDP32754 393 aaPredicted RBP14.65□□□□□ -0.06
SNIP1-202ENST00000468040 INHBCP55103 352 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 DNAJB13P59910 316 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 NAA20P61599 178 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 ZFP36L1Q07352 338 aaKnown RBP14.65□□□□□ -0.06
SNIP1-202ENST00000468040 CDC16Q13042 620 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 PCLAFQ15004 111 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 FBXO48Q5FWF7 155 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 SNAP47Q5SQN1 464 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 PHF19Q5T6S3 580 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 HES3Q5TGS1 186 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 CACHD1Q5VU97 1274 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 LIPMQ5VYY2 423 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 ZNF574Q6ZN55 896 aaPredicted RBP14.65□□□□□ -0.06
SNIP1-202ENST00000468040 TMPRSS9Q7Z410 1059 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 CACTIN-AS1Q8N1I8 211 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 ANKRD42Q8N9B4 389 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 SNX31Q8N9S9 440 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 ADAMTS14Q8WXS8 1223 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 ESAMQ96AP7 390 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 GRAMD1AQ96CP6 724 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 L3HYPDHQ96EM0 354 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 CCDC74BQ96LY2 380 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 DEPDC7Q96QD5 511 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 ZNF768Q9H5H4 540 aaKnown RBP14.65□□□□□ -0.06
SNIP1-202ENST00000468040 OXSMQ9NWU1 459 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 SEMA5BQ9P283 1151 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 CLCA2Q9UQC9 943 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 ASB1Q9Y576 335 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 KLK4Q9Y5K2 254 aa14.65□□□□□ -0.06
SNIP1-202ENST00000468040 KIF1CO43896 1103 aaKnown RBP14.64□□□□□ -0.07
SNIP1-202ENST00000468040 ZBTB11O95625 1053 aaPredicted RBP14.64□□□□□ -0.07
SNIP1-202ENST00000468040 MT-CO3P00414 261 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 RPS17P08708 135 aaKnown RBP14.64□□□□□ -0.07
SNIP1-202ENST00000468040 DHRS4L1P0CG22 281 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 SERPINB4P48594 390 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 ARL4DP49703 201 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 MPP2Q14168 576 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 ZNF678Q5SXM1 525 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 HHATQ5VTY9 493 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 KIAA1614Q5VZ46 1190 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 TRIM73Q86UV7 250 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 TMPRSS12Q86WS5 348 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 C10orf107Q8IVU9 208 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 TEX9Q8N6V9 391 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 PPP4R1Q8TF05 950 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 SLC5A11Q8WWX8 675 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 NEIL2Q969S2 332 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 ZUFSPQ96AP4 578 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 TRAPPC9Q96Q05 1148 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 TMEM237Q96Q45 408 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 STRADBQ9C0K7 418 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 AKAP7Q9P0M2 348 aaPredicted RBP14.64□□□□□ -0.07
SNIP1-202ENST00000468040 PCTPQ9UKL6 214 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 SNX7Q9UNH6 387 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 UNC13CQ8NB66 2214 aa14.64□□□□□ -0.07
SNIP1-202ENST00000468040 IGHV5-51A0A0C4DH38 117 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 SLC9B1P1A6NJY1 282 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 A8MU76 341 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 HGSO14964 777 aaPredicted RBP14.63□□□□□ -0.07
SNIP1-202ENST00000468040 CLGNO14967 610 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 BIRC5O15392 142 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 TRIM13O60858 407 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 CSO75390 466 aaKnown RBP14.63□□□□□ -0.07
SNIP1-202ENST00000468040 SUPT7LO94864 414 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 BPGMP07738 259 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 ST6GAL1P15907 406 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 MAGP20916 626 aa14.63□□□□□ -0.07
SNIP1-202ENST00000468040 ALDH3A1P30838 453 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms