RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 DAAM2Q86T65 1068 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 LILRA3Q8N6C8 439 aaPredicted RBP11.85□□□□□ -0.51
UBR4-210ENST00000466969 DDHD1Q8NEL9 900 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 FLVCR1-AS1Q8TAF5 88 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 KCNK17Q96T54 332 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 SHARPINQ9H0F6 387 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 CDCP1Q9H5V8 836 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 MAGEE1Q9HCI5 957 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 BPIFA1Q9NP55 256 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 ACAD8Q9UKU7 415 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 KLHL20Q9Y2M5 609 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 ZNF711Q9Y462 761 aa11.85□□□□□ -0.51
UBR4-210ENST00000466969 FFAR3O14843 346 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 GPR42O15529 346 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 CD86P42081 329 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 NR0B1P51843 470 aaKnown RBP11.84□□□□□ -0.51
UBR4-210ENST00000466969 ZNF135P52742 658 aaPredicted RBP11.84□□□□□ -0.51
UBR4-210ENST00000466969 ATP5J2P56134 94 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 STIM1Q13586 685 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 EXT1Q16394 746 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 EXOC3L4Q17RC7 722 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 FAM174BQ3ZCQ3 159 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 WASHC2DQ5SRD0 308 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 C6orf52Q5T4I8 152 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 CPEB2Q7Z5Q1 589 aaKnown RBP11.84□□□□□ -0.51
UBR4-210ENST00000466969 ZFP62Q8NB50 900 aaPredicted RBP11.84□□□□□ -0.51
UBR4-210ENST00000466969 M1APQ8TC57 530 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 VPS16Q9H269 839 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 ZWILCHQ9H900 591 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 C19orf25Q9UFG5 118 aaPredicted RBP11.84□□□□□ -0.51
UBR4-210ENST00000466969 CDC14AQ9UNH5 594 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 SNRNP200O75643 2136 aaKnown RBP11.84□□□□□ -0.51
UBR4-210ENST00000466969 CR1P17927 2039 aa11.84□□□□□ -0.51
UBR4-210ENST00000466969 SH3D21A4FU49 640 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 ACOT7O00154 380 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 NDC80O14777 642 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 UGT1A9O60656 530 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 GABRA1P14867 456 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 SRD5A1P18405 259 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 UGT1A6P19224 532 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 CMA1P23946 247 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 GRIA3P42263 894 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 HCAR3P49019 387 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 ZNF165P49910 485 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 ITGA8P53708 1063 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 KRT85P78386 507 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 DPYSQ14117 519 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 KIR2DS3Q14952 304 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 MUM1Q2TAK8 710 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 WLSQ5T9L3 541 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 FBXO42Q6P3S6 717 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 NOP9Q86U38 636 aaKnown RBP11.83□□□□□ -0.52
UBR4-210ENST00000466969 SLC30A5Q8TAD4 765 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 ARRDC2Q8TBH0 407 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 HM13Q8TCT9 377 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 ISL2Q96A47 359 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 KIAA1191Q96A73 305 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 SNRNP25Q9BV90 132 aaKnown RBP11.83□□□□□ -0.52
UBR4-210ENST00000466969 RBSNQ9H1K0 784 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 UGT1A7Q9HAW7 530 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 UGT1A10Q9HAW8 530 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 UGT1A8Q9HAW9 530 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 MMP25Q9NPA2 562 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 MKKSQ9NPJ1 570 aaPredicted RBP11.83□□□□□ -0.52
UBR4-210ENST00000466969 INTS7Q9NVH2 962 aaKnown RBP11.83□□□□□ -0.52
UBR4-210ENST00000466969 RBM22Q9NW64 420 aaKnown RBP eCLIP11.83□□□□□ -0.52
UBR4-210ENST00000466969 TMEM160Q9NX00 188 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.83□□□□□ -0.52
UBR4-210ENST00000466969 OR6C2Q9NZP2 312 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 CWC15Q9P013 229 aaKnown RBP11.83□□□□□ -0.52
UBR4-210ENST00000466969 ZC3H7BQ9UGR2 993 aaKnown RBP11.83□□□□□ -0.52
UBR4-210ENST00000466969 HPSEQ9Y251 543 aa11.83□□□□□ -0.52
UBR4-210ENST00000466969 SIGLEC16A6NMB1 481 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 SRPX2O60687 465 aaPredicted RBP11.82□□□□□ -0.52
UBR4-210ENST00000466969 MED26O95402 600 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 PAX1P15863 534 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 RBMXP38159 391 aaKnown RBP11.82□□□□□ -0.52
UBR4-210ENST00000466969 ARL4AP40617 200 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 PRKCIP41743 596 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 CD151P48509 253 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 PPIAP62937 165 aaKnown RBP11.82□□□□□ -0.52
UBR4-210ENST00000466969 NIPAL4Q0D2K0 466 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 BOP1Q14137 746 aaKnown RBP11.82□□□□□ -0.52
UBR4-210ENST00000466969 ZNF449Q6P9G9 518 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 MAATS1Q7Z4T9 603 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 RPS19BP1Q86WX3 136 aaKnown RBP11.82□□□□□ -0.52
UBR4-210ENST00000466969 TMEM171Q8WVE6 324 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 TFGQ92734 400 aaPredicted RBP11.82□□□□□ -0.52
UBR4-210ENST00000466969 CCDC34Q96HJ3 373 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 LINC00615Q96LM1 132 aaPredicted RBP11.82□□□□□ -0.52
UBR4-210ENST00000466969 ZNF285Q96NJ3 590 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 MCEEQ96PE7 176 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 TGIF2Q9GZN2 237 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 CXorf56Q9H5V9 222 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 ENAMQ9NRM1 1142 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.82□□□□□ -0.52
UBR4-210ENST00000466969 ZNF629Q9UEG4 869 aaPredicted RBP11.82□□□□□ -0.52
UBR4-210ENST00000466969 AMACRQ9UHK6 382 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 TENM1Q9UKZ4 2725 aa11.82□□□□□ -0.52
UBR4-210ENST00000466969 WNK1Q9H4A3 2382 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms