RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 THOC6Q86W42 341 aaKnown RBP14.64□□□□□ -0.07
NPHP4-205ENST00000466897 C2orf73Q8N5S3 287 aaPredicted RBP14.64□□□□□ -0.07
NPHP4-205ENST00000466897 CCDC63Q8NA47 563 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 ARMC2Q8NEN0 867 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 ADAMTS14Q8WXS8 1223 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 ZUFSPQ96AP4 578 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 ZBTB9Q96C00 473 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 PYCR2Q96C36 320 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 TGM7Q96PF1 710 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 OR4K3Q96R72 315 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 ERVK-6Q9BXR3 956 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 ZMYND15Q9H091 742 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 ZNF768Q9H5H4 540 aaKnown RBP14.64□□□□□ -0.07
NPHP4-205ENST00000466897 DNAJC11Q9NVH1 559 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 OXSMQ9NWU1 459 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 OPTCQ9UBM4 332 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 TAC3Q9UHF0 121 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 SLC22A14Q9Y267 594 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 KCNE2Q9Y6J6 123 aa14.64□□□□□ -0.07
NPHP4-205ENST00000466897 HGSO14964 777 aaPredicted RBP14.63□□□□□ -0.07
NPHP4-205ENST00000466897 CASC3O15234 703 aaKnown RBP14.63□□□□□ -0.07
NPHP4-205ENST00000466897 MSL3P1P0C860 447 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 IMPDH1P20839 514 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 PSMB5P28074 263 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 ID4P47928 161 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 PPM1FP49593 454 aaPredicted RBP14.63□□□□□ -0.07
NPHP4-205ENST00000466897 AGTR2P50052 363 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 RELAQ04206 551 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 ASPHQ12797 758 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 CDC16Q13042 620 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 MPP2Q14168 576 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 E2F2Q14209 437 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 SF1Q15637 639 aaKnown RBP14.63□□□□□ -0.07
NPHP4-205ENST00000466897 PDK4Q16654 411 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 HSP90B2PQ58FF3 399 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 ZNF678Q5SXM1 525 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 THEMIS2Q5TEJ8 643 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 LIPMQ5VYY2 423 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 DHRS13Q6UX07 377 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 C17orf64Q86WR6 236 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 TMPRSS12Q86WS5 348 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 DCBLD1Q8N8Z6 715 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 ABHD11Q8NFV4 315 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 KLHL6Q8WZ60 621 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 PHF21BQ96EK2 531 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 DEPDC7Q96QD5 511 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 MAP3K3Q99759 626 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 C12orf65Q9H3J6 166 aaKnown RBP14.63□□□□□ -0.07
NPHP4-205ENST00000466897 EHD1Q9H4M9 534 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 MRPS30Q9NP92 439 aaKnown RBP14.63□□□□□ -0.07
NPHP4-205ENST00000466897 KCNK9Q9NPC2 374 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 TMEM9Q9P0T7 183 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 PCTPQ9UKL6 214 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 BTRCQ9Y297 605 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 ASB1Q9Y576 335 aa14.63□□□□□ -0.07
NPHP4-205ENST00000466897 CNOT1A5YKK6 2376 aaKnown RBP14.62□□□□□ -0.07
NPHP4-205ENST00000466897 BIRC5O15392 142 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 KATNA1O75449 491 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 SIX3O95343 332 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-205ENST00000466897 ZBTB11O95625 1053 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-205ENST00000466897 EPB42P16452 691 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 GNAZP19086 355 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 CDH3P22223 829 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 EEF1DP29692 281 aaKnown RBP14.62□□□□□ -0.07
NPHP4-205ENST00000466897 GRIA3P42263 894 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 GDF5P43026 501 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 LSSP48449 732 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 INHBCP55103 352 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 C18orf21Q32NC0 220 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-205ENST00000466897 CACHD1Q5VU97 1274 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 ZNF425Q6IV72 752 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 FAM92BQ6ZTR7 304 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 ZNF483Q8TF39 744 aaPredicted RBP14.62□□□□□ -0.07
NPHP4-205ENST00000466897 SREK1Q8WXA9 508 aaKnown RBP14.62□□□□□ -0.07
NPHP4-205ENST00000466897 WDR34Q96EX3 536 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 SLC41A2Q96JW4 573 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 CCDC74BQ96LY2 380 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 TRAPPC9Q96Q05 1148 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 TMEM237Q96Q45 408 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 SYNDIG1Q9H7V2 258 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 NKIRAS1Q9NYS0 192 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 SNX7Q9UNH6 387 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 CLCA2Q9UQC9 943 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 DYRK1BQ9Y463 629 aa14.62□□□□□ -0.07
NPHP4-205ENST00000466897 DCHS1Q96JQ0 3298 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 IGHV5-51A0A0C4DH38 117 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 IGKV1-8A0A0C4DH67 115 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 OR2A25A4D2G3 310 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 CCNT2O60583 730 aaKnown RBP14.61□□□□□ -0.07
NPHP4-205ENST00000466897 UGDHO60701 494 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 TRIM13O60858 407 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 H2AFYO75367 372 aaKnown RBP14.61□□□□□ -0.07
NPHP4-205ENST00000466897 RASSF9O75901 435 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 MT-CO3P00414 261 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 BPGMP07738 259 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 ST6GAL1P15907 406 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 NELFEP18615 380 aaKnown RBP14.61□□□□□ -0.07
NPHP4-205ENST00000466897 EPORP19235 508 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 CASP2P42575 452 aa14.61□□□□□ -0.07
NPHP4-205ENST00000466897 SERPINB4P48594 390 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms