RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 LRRC70Q7Z2Q7 622 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 THOC6Q86W42 341 aaKnown RBP15.41■□□□□ 0.06
GPC1-207ENST00000466624 CHCHD4Q8N4Q1 142 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 PYCR2Q96C36 320 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 TLCD1Q96CP7 247 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 SH3GL2Q99962 352 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 CAPS2Q9BXY5 557 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 CD244Q9BZW8 370 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 ACBD3Q9H3P7 528 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 MRPS30Q9NP92 439 aaKnown RBP15.41■□□□□ 0.06
GPC1-207ENST00000466624 AKAP7Q9P0M2 348 aaPredicted RBP15.41■□□□□ 0.06
GPC1-207ENST00000466624 CPSF2Q9P2I0 782 aaKnown RBP15.41■□□□□ 0.06
GPC1-207ENST00000466624 PLLPQ9Y342 182 aa15.41■□□□□ 0.06
GPC1-207ENST00000466624 SPEGQ15772 3267 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 CCDC187A0A096LP49 1063 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 SASH3O75995 380 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 MSL3P1P0C860 447 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 ST6GAL1P15907 406 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 ATP5F1P24539 256 aaPredicted RBP15.4■□□□□ 0.06
GPC1-207ENST00000466624 CSTF2P33240 577 aaKnown RBP eCLIP15.4■□□□□ 0.06
GPC1-207ENST00000466624 GRIA3P42263 894 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 HSD11B2P80365 405 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 TARDBPQ13148 414 aaKnown RBP eCLIP15.4■□□□□ 0.06
GPC1-207ENST00000466624 TSTA3Q13630 321 aaPredicted RBP15.4■□□□□ 0.06
GPC1-207ENST00000466624 C16orf72Q14CZ0 275 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 PFKFB4Q16877 469 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 SNAP47Q5SQN1 464 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 KIAA1614Q5VZ46 1190 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 TRIM73Q86UV7 250 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 C17orf64Q86WR6 236 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 SLC22A9Q8IVM8 553 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 D2HGDHQ8N465 521 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 C19orf47Q8N9M1 422 aaKnown RBP15.4■□□□□ 0.06
GPC1-207ENST00000466624 AGBL5Q8NDL9 886 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 RCBTB1Q8NDN9 531 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 CCDC126Q96EE4 140 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 TCTN2Q96GX1 697 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 PPM1MQ96MI6 270 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 OR4K3Q96R72 315 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 CMKLR1Q99788 373 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 ACAT2Q9BWD1 397 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 C1QTNF3Q9BXJ4 246 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 GPRC5BQ9NZH0 403 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 SLC22A14Q9Y267 594 aa15.4■□□□□ 0.06
GPC1-207ENST00000466624 SLC9B1P1A6NJY1 282 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 A8MT66 165 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 A8MU76 341 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 K7EPI3 171 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 PRPF4O43172 522 aaKnown RBP eCLIP15.39■□□□□ 0.05
GPC1-207ENST00000466624 MAP3K7O43318 606 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 WDR47O94967 919 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 CREB1P16220 341 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 MAGP20916 626 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 HSPA7P48741 367 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 RELAQ04206 551 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 C18orf21Q32NC0 220 aaPredicted RBP15.39■□□□□ 0.05
GPC1-207ENST00000466624 TMTC4Q5T4D3 741 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 CYB5D1Q6P9G0 228 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 ZYG11AQ6WRX3 759 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 PTGR2Q8N8N7 351 aaPredicted RBP15.39■□□□□ 0.05
GPC1-207ENST00000466624 WDR36Q8NI36 951 aaKnown RBP15.39■□□□□ 0.05
GPC1-207ENST00000466624 TCP10LQ8TDR4 215 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 PDE7BQ9NP56 450 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 SLC6A20Q9NP91 592 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 TMEM184CQ9NVA4 438 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 DNAJC11Q9NVH1 559 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 ZNF446Q9NWS9 450 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 SIDT1Q9NXL6 827 aaKnown RBP15.39■□□□□ 0.05
GPC1-207ENST00000466624 OPTCQ9UBM4 332 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 SNX7Q9UNH6 387 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 WASF3Q9UPY6 502 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 DYRK1BQ9Y463 629 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 KCNE2Q9Y6J6 123 aa15.39■□□□□ 0.05
GPC1-207ENST00000466624 MDC1Q14676 2089 aaKnown RBP15.39■□□□□ 0.05
GPC1-207ENST00000466624 IGKV1-8A0A0C4DH67 115 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 OR2A25A4D2G3 310 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 B4E171 279 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 G3V2L1 256 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 TM9SF1O15321 606 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 ATP8B1O43520 1251 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 HYAL3O43820 417 aaPredicted RBP15.38■□□□□ 0.05
GPC1-207ENST00000466624 DLX3O60479 287 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 SPAG7O75391 227 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 ADRB1P08588 477 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 MYL2P10916 166 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 PVRP15151 417 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 GNAZP19086 355 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 TSPAN7P41732 249 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 GDF5P43026 501 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 PIK3CGP48736 1102 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 ARL4DP49703 201 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 SEPHS1P49903 392 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 NAA20P61599 178 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 PCDH1Q08174 1060 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 FOXC1Q12948 553 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 CDC16Q13042 620 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 PDK4Q16654 411 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 FCRL6Q6DN72 434 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 ZNF425Q6IV72 752 aa15.38■□□□□ 0.05
GPC1-207ENST00000466624 FIGLAQ6QHK4 219 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms