RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 CHST11Q9NPF2 352 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 ABCB8Q9NUT2 735 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 PKD2L2Q9NZM6 624 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 SEPT10Q9P0V9 454 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 TAAR2Q9P1P5 351 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 KCNG2Q9UJ96 466 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 STUB1Q9UNE7 303 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 HEG1Q9ULI3 1381 aa4□□□□□ -1.77
CDC42BPA-211ENST00000466538 LRRD1A4D1F6 860 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 P2RY10O00398 339 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 PPIP5K2O43314 1243 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 SELENOFO60613 162 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 PRAF2O60831 178 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 TSHBP01222 138 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 APOHP02749 345 aaPredicted RBP3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 EDN1P05305 212 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 IGHV4-31P0DP07 118 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 EEF2P13639 858 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 ATP6V1B1P15313 513 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 STX1BP61266 288 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 ASIC1P78348 528 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 RPL36AP83881 106 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 ARL16Q0P5N6 197 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 TAZQ16635 292 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 SMU1Q2TAY7 513 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 KBTBD12Q3ZCT8 623 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 WDR38Q5JTN6 314 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 GLRA4Q5JXX5 417 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 LYSMD4Q5XG99 296 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 KIAA1161Q6NSJ0 714 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 CYB5D1Q6P9G0 228 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 C19orf48Q6RUI8 117 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 C10orf53Q8N6V4 93 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 NCOA7Q8NI08 942 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 OLIG1Q8TAK6 271 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 PTP4A1Q93096 173 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 TEKT1Q969V4 418 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 SGF29Q96ES7 293 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 CCDC43Q96MW1 224 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 GDAP1L1Q96MZ0 367 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 MAP3K3Q99759 626 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 PSD2Q9BQI7 771 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF350Q9GZX5 532 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 SDCBP2Q9H190 292 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 MMADHCQ9H3L0 296 aaPredicted RBP3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 BICC1Q9H694 974 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 ADPRHL2Q9NX46 363 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 SLCO1C1Q9NYB5 712 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 DONSONQ9NYP3 566 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 MAN1B1Q9UKM7 699 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 PA2G4Q9UQ80 394 aaKnown RBP3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 CHKBQ9Y259 395 aa3.99□□□□□ -1.77
CDC42BPA-211ENST00000466538 TMEM150CB9EJG8 249 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 BMPR1BO00238 502 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 RAD51DO75771 328 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 DFFBO76075 338 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 MOCS2O96007 188 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 PLGP00747 810 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 FRMD6-AS1P0C7T7 363 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 PSMB4P28070 264 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 DLX5P56178 289 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 ST8SIA6P61647 398 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 RASGEF1BQ0VAM2 473 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 NONOQ15233 471 aaKnown RBP eCLIP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF718Q3SXZ3 478 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZC2HC1CQ53FD0 456 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 SLC10A5Q5PT55 438 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 SUSD4Q5VX71 490 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 SLC35E4Q6ICL7 350 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 IL17RELQ6ZVW7 336 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 ANKRD33Q7Z3H0 272 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 RTN4RL2Q86UN3 420 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 SNX32Q86XE0 403 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 CCDC170Q8IYT3 715 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 CLYBLQ8N0X4 340 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 MARVELD2Q8N4S9 558 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 AMER3Q8N944 861 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 LMNTD1Q8N9Z9 388 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 UBLCP1Q8WVY7 318 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 TM9SF4Q92544 642 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 TMEM143Q96AN5 459 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 SNRNP40Q96DI7 357 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 ALG14Q96F25 216 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF354BQ96LW1 612 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 MRPL9Q9BYD2 267 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 OR2B2Q9GZK3 357 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 FAM49AQ9H0Q0 323 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 MMP28Q9H239 520 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 ZNF334Q9HCZ1 680 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 FAM207AQ9NSI2 230 aaPredicted RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 DNAJC17Q9NVM6 304 aaKnown RBP3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 MTRRQ9UBK8 725 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 GRID1Q9ULK0 1009 aa3.98□□□□□ -1.77
CDC42BPA-211ENST00000466538 IGHV4-61A0A0C4DH41 118 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 ILVBLA1L0T0 632 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 KBTBD13C9JR72 458 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 IGHV4-59P01825 116 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 PRSS1P07477 247 aa3.97□□□□□ -1.77
CDC42BPA-211ENST00000466538 ITIH1P19827 911 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms