RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 SMC3Q9UQE7 1217 aa5.62□□□□□ -1.51
NCL-208ENST00000466274 SIK3Q9Y2K2 1263 aa5.62□□□□□ -1.51
NCL-208ENST00000466274 PRKAB1Q9Y478 270 aa5.62□□□□□ -1.51
NCL-208ENST00000466274 AP1M2Q9Y6Q5 423 aa5.62□□□□□ -1.51
NCL-208ENST00000466274 TRAFD1O14545 582 aaPredicted RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 ZNF749O43361 778 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 SOCS5O75159 536 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 CALCAP01258 141 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 MYL1P05976 194 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 PIM1P11309 404 aaPredicted RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 ZNF30P17039 623 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 VCLP18206 1134 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 CASP1P29466 404 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 SCNN1BP51168 640 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 ABRQ12979 859 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 PRKAA1Q13131 559 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 TUBA3CQ13748 450 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 RFTN1Q14699 578 aaPredicted RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 STK38Q15208 465 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 SMN1Q16637 294 aaKnown RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 INSCQ1MX18 579 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 TUBB8Q3ZCM7 444 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 TDRD12Q587J7 1177 aaKnown RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 TMEM200BQ69YZ2 307 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 TUBA3EQ6PEY2 450 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 ABRAXAS1Q6UWZ7 409 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 WASH2PQ6VEQ5 465 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 CERS6Q6ZMG9 384 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 PHLDB2Q86SQ0 1253 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 RTTNQ86VV8 2226 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 FAM131BQ86XD5 332 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 CDC20BQ86Y33 519 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 RAVER1Q8IY67 606 aaKnown RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 CPSF7Q8N684 471 aaKnown RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 AMER2Q8N7J2 671 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 RTL3Q8N8U3 475 aaKnown RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 ZFPM2Q8WW38 1151 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 ASB15Q8WXK1 588 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 SCRN2Q96FV2 425 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 TBCBQ99426 244 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 GPATCH1Q9BRR8 931 aaKnown RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 ABCG8Q9H221 673 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 NELFAQ9H3P2 528 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 UPF2Q9HAU5 1272 aaKnown RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 FANCLQ9NW38 375 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 HRASLS2Q9NWW9 162 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 LRFN1Q9P244 771 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 ZNF624Q9P2J8 865 aaPredicted RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 CD84Q9UIB8 345 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 DNPEPQ9ULA0 475 aa5.61□□□□□ -1.51
NCL-208ENST00000466274 LUC7L2Q9Y383 392 aaKnown RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 FLNAP21333 2647 aaKnown RBP5.61□□□□□ -1.51
NCL-208ENST00000466274 NKX2-6A6NCS4 301 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 OR5K3A6NET4 321 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 FAM227AF5H4B4 570 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 H7C1Q1 480 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 KMOO15229 486 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 PMM2O15305 246 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 SLC16A3O15427 465 aaKnown RBP5.6□□□□□ -1.51
NCL-208ENST00000466274 STK10O94804 968 aaKnown RBP5.6□□□□□ -1.51
NCL-208ENST00000466274 TOXO94900 526 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 SOD1P00441 154 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 ATP1A1P05023 1023 aaKnown RBP5.6□□□□□ -1.51
NCL-208ENST00000466274 NAT1P18440 290 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 EPHB2P29323 1055 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 PPP1CAP62136 330 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 AP2B1P63010 937 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 ALDH6A1Q02252 535 aaKnown RBP5.6□□□□□ -1.51
NCL-208ENST00000466274 TFF3Q07654 80 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 PCBP2Q15366 365 aaKnown RBP eCLIP5.6□□□□□ -1.51
NCL-208ENST00000466274 CATSPEREQ5SY80 951 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 MANEALQ5VSG8 457 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 AGAP9Q5VTM2 703 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 OTUD1Q5VV17 481 aaPredicted RBP5.6□□□□□ -1.51
NCL-208ENST00000466274 RRAGAQ7L523 313 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 P3H2Q8IVL5 708 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 GHDCQ8N2G8 530 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 OR1L3Q8NH93 324 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 DENND1AQ8TEH3 1009 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 RND1Q92730 232 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 FAM81BQ96LP2 452 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 GBP4Q96PP9 640 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 DMRTA2Q96SC8 542 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 TLR10Q9BXR5 811 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 GTPBP4Q9BZE4 634 aaKnown RBP5.6□□□□□ -1.51
NCL-208ENST00000466274 TXLNGQ9NUQ3 528 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 TRPS1Q9UHF7 1281 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 CNTN6Q9UQ52 1028 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 MTMR6Q9Y217 621 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 HIVEP2P31629 2446 aa5.6□□□□□ -1.51
NCL-208ENST00000466274 MYO7BQ6PIF6 2116 aa5.59□□□□□ -1.51
NCL-208ENST00000466274 A0A087X1B8 175 aa5.59□□□□□ -1.51
NCL-208ENST00000466274 ARHGAP42A6NI28 874 aa5.59□□□□□ -1.51
NCL-208ENST00000466274 OR52A4PA6NMU1 304 aa5.59□□□□□ -1.51
NCL-208ENST00000466274 USP27XA6NNY8 438 aa5.59□□□□□ -1.51
NCL-208ENST00000466274 CAPN14A8MX76 684 aa5.59□□□□□ -1.51
NCL-208ENST00000466274 NPIPA5E9PKD4 350 aa5.59□□□□□ -1.51
NCL-208ENST00000466274 CES2O00748 559 aa5.59□□□□□ -1.51
NCL-208ENST00000466274 P4HA2O15460 535 aa5.59□□□□□ -1.51
NCL-208ENST00000466274 TTI1O43156 1089 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms