RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 CMPK1P30085 196 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 ABATP80404 500 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 MAP7Q14244 749 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 CSHL1Q14406 222 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 ERCC6LQ2NKX8 1250 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 ADGRD1Q6QNK2 874 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 RAPH1Q70E73 1250 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 AENQ8WTP8 325 aaKnown RBP19.53■□□□□ 0.72
SKA3-205ENST00000465471 ATL1Q8WXF7 558 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 KIAA1191Q96A73 305 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 ACAT2Q9BWD1 397 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 UNKQ9C0B0 810 aaKnown RBP19.53■□□□□ 0.72
SKA3-205ENST00000465471 ATG10Q9H0Y0 220 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 FANCEQ9HB96 536 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 UTP6Q9NYH9 597 aaKnown RBP19.53■□□□□ 0.72
SKA3-205ENST00000465471 ACOT9Q9Y305 439 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 IKBKGQ9Y6K9 419 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 KMT2BQ9UMN6 2715 aaPredicted RBP19.53■□□□□ 0.72
SKA3-205ENST00000465471 CFAP47Q6ZTR5 3102 aa19.53■□□□□ 0.72
SKA3-205ENST00000465471 NRP2O60462 931 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 KRT38O76015 456 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 CCNDBP1O95273 360 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 LTA4HP09960 611 aaKnown RBP19.52■□□□□ 0.72
SKA3-205ENST00000465471 NAE1Q13564 534 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 TGFBIQ15582 683 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 OR4D1Q15615 310 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 DEFB110Q30KQ9 67 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 PRAMEF13Q5VWM6 474 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 ZNF425Q6IV72 752 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 RNF44Q7L0R7 432 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 TAOK1Q7L7X3 1001 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 TIPARPQ7Z3E1 657 aaKnown RBP19.52■□□□□ 0.72
SKA3-205ENST00000465471 TBC1D1Q86TI0 1168 aaPredicted RBP19.52■□□□□ 0.72
SKA3-205ENST00000465471 SPACA3Q8IXA5 215 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 DPH7Q9BTV6 452 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 ULBP3Q9BZM4 244 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 PCBD2Q9H0N5 130 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 MRPS30Q9NP92 439 aaKnown RBP19.52■□□□□ 0.72
SKA3-205ENST00000465471 PCDHB3Q9Y5E6 796 aa19.52■□□□□ 0.72
SKA3-205ENST00000465471 A0A096LPK6 155 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 PABPN1LA6NDY0 278 aaKnown RBP19.51■□□□□ 0.71
SKA3-205ENST00000465471 RRP8O43159 456 aaKnown RBP19.51■□□□□ 0.71
SKA3-205ENST00000465471 CTSVO60911 334 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 KIAA0754O94854 1291 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 GUCA1CO95843 209 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 TYK2P29597 1187 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 IRF9Q00978 393 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 TSTA3Q13630 321 aaPredicted RBP19.51■□□□□ 0.71
SKA3-205ENST00000465471 TGIF1Q15583 401 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 CDKL4Q5MAI5 379 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 LCTLQ6UWM7 567 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 ISCA2Q86U28 154 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 PAQR7Q86WK9 346 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 KLHDC8AQ8IYD2 350 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 KCTD4Q8WVF5 259 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 NKD1Q969G9 470 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 NAF1Q96HR8 494 aaKnown RBP19.51■□□□□ 0.71
SKA3-205ENST00000465471 ZNF285Q96NJ3 590 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 DCBLD2Q96PD2 775 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 PLCD4Q9BRC7 762 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 NMRAL1Q9HBL8 299 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 EURLQ9NYK6 297 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 PLCL2Q9UPR0 1127 aa19.51■□□□□ 0.71
SKA3-205ENST00000465471 CCDC189A1A4V9 331 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 TRIM49D1C9J1S8 452 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 RAD1O60671 282 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 SCRG1O75711 98 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 CTSBP07858 339 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 ANXA5P08758 320 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 GCGRP47871 477 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 KCNC1P48547 511 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 HNMTP50135 292 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 ITGA1P56199 1179 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 RELAQ04206 551 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 TLE3Q04726 772 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 TAF1BQ53T94 588 aaPredicted RBP19.5■□□□□ 0.71
SKA3-205ENST00000465471 CAPN13Q6MZZ7 669 aaPredicted RBP19.5■□□□□ 0.71
SKA3-205ENST00000465471 EMBQ6PCB8 327 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 FRA10AC1Q70Z53 315 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 NLGN4XQ8N0W4 816 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 NLGN4YQ8NFZ3 816 aaPredicted RBP19.5■□□□□ 0.71
SKA3-205ENST00000465471 RHBDF1Q96CC6 855 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 NXNL1Q96CM4 212 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 MED8Q96G25 268 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 GPR78Q96P69 363 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 OR4K3Q96R72 315 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 ATOH8Q96SQ7 321 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 CUEDC1Q9NWM3 386 aaPredicted RBP19.5■□□□□ 0.71
SKA3-205ENST00000465471 SERTAD3Q9UJW9 196 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 TLK1Q9UKI8 766 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 RAB21Q9UL25 225 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 SH2B3Q9UQQ2 575 aa19.5■□□□□ 0.71
SKA3-205ENST00000465471 DSPP15924 2871 aaKnown RBP19.5■□□□□ 0.71
SKA3-205ENST00000465471 TEX51A0A1B0GUA7 166 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 CPNE3O75131 537 aaKnown RBP19.49■□□□□ 0.71
SKA3-205ENST00000465471 KRT37O76014 449 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 KLHL2O95198 593 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 SHBGP04278 402 aa19.49■□□□□ 0.71
SKA3-205ENST00000465471 SNRPAP09012 282 aaKnown RBP19.49■□□□□ 0.71
SKA3-205ENST00000465471 NPPBP16860 134 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms