RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 MAGEA6P43360 314 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 BDKRB1P46663 353 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 VSX2P58304 361 aaPredicted RBP17.07■□□□□ 0.32
SSB-206ENST00000461708 ARHGAP19Q14CB8 494 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 RBBP7Q16576 425 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 ANKRD20A4Q4UJ75 823 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 B3GNTL1Q67FW5 361 aaPredicted RBP17.07■□□□□ 0.32
SSB-206ENST00000461708 KIAA0930Q6ICG6 404 aaPredicted RBP17.07■□□□□ 0.32
SSB-206ENST00000461708 GSTA5Q7RTV2 222 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 OR11G2Q8NGC1 345 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 MFSD3Q96ES6 412 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 ZNF304Q9HCX3 659 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 FAM114A2Q9NRY5 505 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 SLC5A6Q9Y289 635 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 VPS9D1Q9Y2B5 631 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 LRBAP50851 2863 aa17.07■□□□□ 0.32
SSB-206ENST00000461708 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.06■□□□□ 0.32
SSB-206ENST00000461708 IGLV3-12A0A075B6K2 115 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 MYO1CO00159 1063 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 MASP2O00187 686 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 LDLRP01130 860 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 FGGP02679 453 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 PSMB5P28074 263 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 CMPK1P30085 196 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 TSFMP43897 325 aaKnown RBP17.06■□□□□ 0.32
SSB-206ENST00000461708 OR1D4P47884 311 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 SARNPP82979 210 aaKnown RBP17.06■□□□□ 0.32
SSB-206ENST00000461708 RELAQ04206 551 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 OCA2Q04671 838 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 MUM1Q2TAK8 710 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 PRTGQ2VWP7 1150 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 FRMPD2BQ6IN97 320 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 CNSTQ6PJW8 725 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 OTUD6BQ8N6M0 293 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 OR9A1PQ8NGU1 263 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 SMPDL3AQ92484 453 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 MVB12AQ96EY5 273 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 LMF1Q96S06 567 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 ZFYVE21Q9BQ24 234 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 SOX17Q9H6I2 414 aaPredicted RBP17.06■□□□□ 0.32
SSB-206ENST00000461708 SYBUQ9NX95 663 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 KLHL42Q9P2K6 505 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 ZNF282Q9UDV7 671 aaPredicted RBP17.06■□□□□ 0.32
SSB-206ENST00000461708 ERRFI1Q9UJM3 462 aaPredicted RBP17.06■□□□□ 0.32
SSB-206ENST00000461708 RUVBL2Q9Y230 463 aaKnown RBP17.06■□□□□ 0.32
SSB-206ENST00000461708 CACNA1DQ01668 2161 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 ZGRF1Q86YA3 2104 aa17.06■□□□□ 0.32
SSB-206ENST00000461708 LOC105369274A0A096LPK9 316 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 LOC102723532A0A0G2JNH3 316 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 A0A1W2PQ72 361 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 PCDH17O14917 1159 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 NIPSNAP2O75323 286 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 PSIP1O75475 530 aaKnown RBP17.05■□□□□ 0.32
SSB-206ENST00000461708 HPP00738 406 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 PAMP19021 973 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 FMO4P31512 558 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 ELOAQ14241 798 aaKnown RBP17.05■□□□□ 0.32
SSB-206ENST00000461708 FBXO42Q6P3S6 717 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 NEK10Q6ZWH5 1172 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 MAMDC2Q7Z304 686 aaPredicted RBP17.05■□□□□ 0.32
SSB-206ENST00000461708 OR4N4Q8N0Y3 316 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 ST6GALNAC3Q8NDV1 305 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 STT3BQ8TCJ2 826 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 DPH7Q9BTV6 452 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 CRB3Q9BUF7 120 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 EPS8L2Q9H6S3 715 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 INTS10Q9NVR2 710 aaKnown RBP17.05■□□□□ 0.32
SSB-206ENST00000461708 UTP6Q9NYH9 597 aaKnown RBP17.05■□□□□ 0.32
SSB-206ENST00000461708 ZC3H7BQ9UGR2 993 aaKnown RBP17.05■□□□□ 0.32
SSB-206ENST00000461708 CDC14AQ9UNH5 594 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 NOVA2Q9UNW9 492 aaKnown RBP17.05■□□□□ 0.32
SSB-206ENST00000461708 NTNG1Q9Y2I2 539 aa17.05■□□□□ 0.32
SSB-206ENST00000461708 A0A0J9YVX5 310 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 MAGEB16A2A368 324 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 PRPF4O43172 522 aaKnown RBP eCLIP17.04■□□□□ 0.32
SSB-206ENST00000461708 VPS26AO75436 327 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 MED26O95402 600 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 ZGLP1P0C6A0 271 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 ACPPP15309 386 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 KCNJ1P48048 391 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 GLRBP48167 497 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 KLC1Q07866 573 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 DSG2Q14126 1118 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 KCNJ11Q14654 390 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 TLR1Q15399 786 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 HIF1AQ16665 826 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 ATG9BQ674R7 924 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 NEPROQ6NW34 567 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 ISLR2Q6UXK2 745 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 CILP2Q8IUL8 1156 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 FBXO15Q8NCQ5 510 aaPredicted RBP17.04■□□□□ 0.32
SSB-206ENST00000461708 TRIM58Q8NG06 486 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 DNAJB14Q8TBM8 379 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 MIEF2Q96C03 454 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 C10orf90Q96M02 699 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 C5orf34Q96MH7 638 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 PLCD4Q9BRC7 762 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 MAU2Q9Y6X3 613 aa17.04■□□□□ 0.32
SSB-206ENST00000461708 ABCA12Q86UK0 2595 aa17.03■□□□□ 0.32
SSB-206ENST00000461708 KRT87PA6NCN2 255 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms