RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 COL1A1P02452 1464 aaPredicted RBP3.38□□□□□ -1.87
SSX2IP-204ENST00000459708 CACNA1SQ13698 1873 aa3.38□□□□□ -1.87
SSX2IP-204ENST00000459708 DDX60LQ5H9U9 1706 aaKnown RBP3.38□□□□□ -1.87
SSX2IP-204ENST00000459708 ATP8B3O60423 1300 aa3.38□□□□□ -1.87
SSX2IP-204ENST00000459708 ZNF532Q9HCE3 1301 aa3.38□□□□□ -1.87
SSX2IP-204ENST00000459708 MYH14Q7Z406 1995 aaKnown RBP3.38□□□□□ -1.87
SSX2IP-204ENST00000459708 FOCADQ5VW36 1801 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 GPR75-ASB3A0A0A6YYF3 556 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 KLF18A0A0U1RQI7 1052 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 LNP1A1A4G5 178 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 VPS37CA5D8V6 355 aaPredicted RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 DUXAA6NLW8 204 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 H0YIN7 160 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 IFIT3O14879 490 aaKnown RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 SLC22A2O15244 555 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 NDUFS4O43181 175 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 GPR137BO60478 399 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 GJB3O75712 270 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 WDHD1O75717 1129 aaPredicted RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 RSL1D1O76021 490 aaKnown RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 FGFR1OPO95684 399 aaKnown RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 APOHP02749 345 aaPredicted RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 TPM1P09493 284 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 ERVK-10P10266 1014 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 ACP2P11117 423 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 CKMT2P17540 419 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 ANXA13P27216 316 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 PSMB10P40306 273 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 SLC15A1P46059 708 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 TIMM10P62072 90 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 MC1RQ01726 317 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 ENPEPQ07075 957 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 STK38Q15208 465 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 FAM43BQ6ZT52 329 aaPredicted RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 GALNT5Q7Z7M9 940 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 DZIP1Q86YF9 867 aaKnown RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 APLFQ8IW19 511 aaPredicted RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 TBC1D16Q8TBP0 767 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 PIBF1Q8WXW3 757 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 FAM120BQ96EK7 910 aaKnown RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 HRH4Q9H3N8 390 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 SMARCAD1Q9H4L7 1026 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 DENND2DQ9H6A0 471 aaPredicted RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 SYNCQ9H7C4 482 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 PELI2Q9HAT8 420 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 LY9Q9HBG7 655 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 AATFQ9NY61 560 aaKnown RBP eCLIP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 NAP1L2Q9ULW6 460 aaPredicted RBP3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 MROH7-TTC4A0A0A0MT08 1334 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 ITIH6Q6UXX5 1313 aa3.37□□□□□ -1.87
SSX2IP-204ENST00000459708 PRSS51A0A1B0GVH4 220 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 NTN3O00634 580 aaPredicted RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 DYNC1I1O14576 645 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 PAPSS1O43252 624 aaPredicted RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 SH3BP5O60239 455 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 ENTPD3O75355 529 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 IGHV4-38-2P0DP08 117 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 KRT2P35908 639 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 SYKP43405 635 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 PSMC4P43686 418 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 SNRPEP62304 92 aaKnown RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 SNRPFP62306 86 aaKnown RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 MRPS5P82675 430 aaKnown RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 MYL5Q02045 173 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 CREB5Q02930 508 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 GAGE2BQ13066 116 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 AIMP2Q13155 320 aaKnown RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 ITPK1Q13572 414 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 PDIA5Q14554 519 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 DUSP28Q4G0W2 176 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 GAGE2EQ4V326 116 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 FAM98BQ52LJ0 330 aaKnown RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 CEP85LQ5SZL2 805 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 GCNT6Q5T4J0 391 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 C12orf60Q5U649 245 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 RESP18Q5W5W9 173 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 FAM205BPQ63HN1 556 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 FAM53AQ6NSI3 398 aaPredicted RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 GAGE2AQ6NT46 116 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 KLC3Q6P597 504 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 OLFM4Q6UX06 510 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 C4orf50Q6ZRC1 276 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 DENND5BQ6ZUT9 1274 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 FAM114A1Q8IWE2 563 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 L3MBTL4Q8NA19 623 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 IQUBQ8NA54 791 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 OR2T12Q8NG77 320 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 SLC47A1Q96FL8 570 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 DUX3Q96PT4 197 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 SDF4Q9BRK5 362 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 MXD3Q9BW11 206 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 RBM4Q9BWF3 364 aaKnown RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 IDI2Q9BXS1 227 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 MAK16Q9BXY0 300 aaKnown RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 EDEM3Q9BZQ6 932 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 ZMYND12Q9H0C1 365 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 NT5C3AQ9H0P0 336 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 DEFB129Q9H1M3 183 aa3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 ZBTB20Q9HC78 741 aaPredicted RBP3.36□□□□□ -1.87
SSX2IP-204ENST00000459708 GAGE2DQ9UEU5 116 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms