RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 RIPPLY3P57055 190 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 KCNK10P57789 538 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 ARG2P78540 354 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 DSG2Q14126 1118 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 SEMA3AQ14563 771 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.94□□□□□ -0.822e-10■□□□□ 10.8
HDLBP-227ENST00000458564 PRTGQ2VWP7 1150 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 FASTKD1Q53R41 847 aaKnown RBP9.94□□□□□ -0.82
HDLBP-227ENST00000458564 MTFR2Q6P444 385 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 TTC23LQ6PF05 361 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 BNC2Q6ZN30 1099 aaPredicted RBP9.94□□□□□ -0.82
HDLBP-227ENST00000458564 RAB42Q8N4Z0 105 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 DNAAF3Q8N9W5 541 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 OR2A1Q8NGT9 310 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 CFAP61Q8NHU2 1237 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 BRIX1Q8TDN6 353 aaKnown RBP9.94□□□□□ -0.82
HDLBP-227ENST00000458564 C8orf44Q96CB5 159 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 ZNF778Q96MU6 729 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 PANX3Q96QZ0 392 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 ZFYVE21Q9BQ24 234 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 C14orf105Q9NVL8 296 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 RIC8BQ9NVN3 520 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 ABI3Q9P2A4 366 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 CIDEBQ9UHD4 219 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 R3HDM2Q9Y2K5 976 aaKnown RBP9.94□□□□□ -0.82
HDLBP-227ENST00000458564 TCAF1Q9Y4C2 921 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 DUSP10Q9Y6W6 482 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 PKDREJQ9NTG1 2253 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 ZFHX3Q15911 3703 aa9.94□□□□□ -0.82
HDLBP-227ENST00000458564 LOC102723996A0A087X1L8 192 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 LOC105369274A0A096LPK9 316 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 IGHV1-45A0A0A0MS14 117 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 LOC102723532A0A0G2JNH3 316 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 A0A1W2PPV9 198 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 MIF4GDA9UHW6 222 aaKnown RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 IDSB3KWA1 339 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 KPNA5O15131 536 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 PRPF4O43172 522 aaKnown RBP eCLIP9.93□□□□□ -0.828e-7■■■■□ 19.6
HDLBP-227ENST00000458564 NRP2O60462 931 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 ERGP11308 486 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 PTMSP20962 102 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 FBLP22087 321 aaKnown RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 PSMB5P28074 263 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 GRNP28799 593 aaKnown RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 STIP1P31948 543 aaKnown RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 FDFT1P37268 417 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 CCNFP41002 786 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 TTPAP49638 278 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 AP2B1P63010 937 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 PRAMEP78395 509 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 VWA2Q5GFL6 755 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 MYO7BQ6PIF6 2116 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 CNSTQ6PJW8 725 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 RPTNQ6XPR3 784 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 GDF7Q7Z4P5 450 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 LRRC6Q86X45 466 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 OR4N4Q8N0Y3 316 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 KRT222Q8N1A0 295 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 MPP5Q8N3R9 675 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 ZNF808Q8N4W9 903 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 OR6P1Q8NGX9 317 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 DNAJB8Q8NHS0 232 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 CCDC120Q96HB5 630 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 MAGEB10Q96LZ2 347 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 MIPEPQ99797 713 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 TGIF2Q9GZN2 237 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 LACRTQ9GZZ8 138 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 P2RY12Q9H244 342 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 CHST11Q9NPF2 352 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 SPATA7Q9P0W8 599 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 PTGFRNQ9P2B2 879 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 MARCH4Q9P2E8 410 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 SUCOQ9UBS9 1254 aaKnown RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 ZC3H7BQ9UGR2 993 aaKnown RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 GNPTGQ9UJJ9 305 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 CDC14AQ9UNH5 594 aa9.93□□□□□ -0.82
HDLBP-227ENST00000458564 REXO2Q9Y3B8 237 aaKnown RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 EPN1Q9Y6I3 576 aaPredicted RBP9.93□□□□□ -0.82
HDLBP-227ENST00000458564 A0A0J9YVX5 310 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 SOWAHDA6NJG2 315 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 IPO7O95373 1038 aaKnown RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 CRYABP02511 175 aaKnown RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 PTMAP06454 111 aaKnown RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 ERVK-10P10266 1014 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 RPS3P23396 243 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 CXCR2P25025 360 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 ATP5DP30049 168 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 SLC26A3P40879 764 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 GRIA1P42261 906 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 CA7P43166 264 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 EMP2P54851 167 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 NAP1L1P55209 391 aaKnown RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 GBX1Q14549 363 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 OASLQ15646 514 aaKnown RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 ZNF630Q2M218 657 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 ZXDCQ2QGD7 858 aaPredicted RBP9.92□□□□□ -0.82
HDLBP-227ENST00000458564 CCSMST1Q4G0I0 132 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 GARNL3Q5VVW2 1013 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 GFRALQ6UXV0 394 aa9.92□□□□□ -0.82
HDLBP-227ENST00000458564 PPP1R21Q6ZMI0 780 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms