RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ZBTB26Q9HCK0 441 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 STOX2Q9P2F5 926 aaPredicted RBP8.68□□□□□ -1.02
VPS50-207ENST00000458530 KLQ9UEF7 1012 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 EBF1Q9UH73 591 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 POLG2Q9UHN1 485 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 CYP8B1Q9UNU6 501 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 MSRB2Q9Y3D2 182 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 DYRK1BQ9Y463 629 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 DNAJC15Q9Y5T4 150 aa8.68□□□□□ -1.02
VPS50-207ENST00000458530 OR7A17O14581 309 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 ULK1O75385 1050 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CBX6O95503 412 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CEACAM5P06731 702 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CAPN1P07384 714 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 THRAP10827 490 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 SLC2A4P14672 509 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 IDO1P14902 403 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 ACADLP28330 430 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 PDHA2P29803 388 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 HNF4AP41235 474 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 GNPDA1P46926 289 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 PXNP49023 591 aaPredicted RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 CLCNKAP51800 687 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 PFN3P60673 137 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 PHEXP78562 749 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CTBSQ01459 385 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 ACACAQ13085 2346 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 KRT33BQ14525 404 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 RPS6KA2Q15349 733 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 IMPG1Q17R60 797 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 UGT3A2Q3SY77 523 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 ATP6AP1LQ52LC2 224 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 PYCR3Q53H96 274 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 FBXO48Q5FWF7 155 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 XKR7Q5GH72 579 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 LIPJQ5W064 366 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 LETMD1Q6P1Q0 360 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 IL27RAQ6UWB1 636 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 SLC36A4Q6YBV0 504 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 MBOAT1Q6ZNC8 495 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CHSY3Q70JA7 882 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CHST15Q7LFX5 561 aaPredicted RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 PIP4P1Q86T03 277 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 THOC6Q86W42 341 aaKnown RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 MYLK4Q86YV6 388 aaPredicted RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 LILRA3Q8N6C8 439 aaPredicted RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 L3MBTL4Q8NA19 623 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 OR52B6Q8NGF0 335 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 OR56A3Q8NH54 315 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 PRR7Q8TB68 274 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 SETD7Q8WTS6 366 aaKnown RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 ESAMQ96AP7 390 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 MED8Q96G25 268 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 PPP3R2Q96LZ3 170 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CATSPER2Q96P56 530 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 HHIPQ96QV1 700 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 PKP4Q99569 1192 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 MYOCQ99972 504 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 HAUS8Q9BT25 410 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 ELOVL6Q9H5J4 265 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 MVB12BQ9H7P6 319 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CARS2Q9HA77 564 aaKnown RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 FZD3Q9NPG1 666 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CCDC177Q9NQR7 707 aaPredicted RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 KLC4Q9NSK0 619 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 TMEM45AQ9NWC5 275 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 WSB2Q9NYS7 404 aaPredicted RBP8.67□□□□□ -1.02
VPS50-207ENST00000458530 ARMCX1Q9P291 453 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 SUFUQ9UMX1 484 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 GPSM3Q9Y4H4 160 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 KCNE2Q9Y6J6 123 aa8.67□□□□□ -1.02
VPS50-207ENST00000458530 CELSR3Q9NYQ7 3312 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 BBIP1A8MTZ0 92 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 PDZK1P1A8MUH7 402 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 GYG2O15488 501 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 SLC16A8O95907 504 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 GNAZP19086 355 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 IMPA1P29218 277 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 BLKP51451 505 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 ERVPABLB-1P60509 514 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 ERVK-8P63133 956 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 IRF8Q02556 426 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 PCDH1Q08174 1060 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 GRIK2Q13002 908 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 KLF10Q13118 480 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 NAE1Q13564 534 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 LAPTM5Q13571 262 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 UBAP2LQ14157 1087 aaKnown RBP8.66□□□□□ -1.02
VPS50-207ENST00000458530 NR6A1Q15406 480 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 HIST2H2ACQ16777 129 aaPredicted RBP8.66□□□□□ -1.02
VPS50-207ENST00000458530 KIF19Q2TAC6 998 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 C18orf21Q32NC0 220 aaPredicted RBP8.66□□□□□ -1.02
VPS50-207ENST00000458530 PAGE2BQ5JRK9 111 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 HIST2H2AA3Q6FI13 130 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 ENPP7Q6UWV6 458 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 WASH2PQ6VEQ5 465 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 GCNT7Q6ZNI0 430 aa8.66□□□□□ -1.02
VPS50-207ENST00000458530 FAM83HQ6ZRV2 1179 aaPredicted RBP8.66□□□□□ -1.02
VPS50-207ENST00000458530 LARP4Q71RC2 724 aaKnown RBP eCLIP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms