RNA–Protein interactions for RNA: ENST00000458337.5

COMMD1-206, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-206ENST00000458337 CCDC88CQ9P219 2028 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 MDC1Q14676 2089 aaKnown RBP12.78□□□□□ -0.36
COMMD1-206ENST00000458337 IGKV1-8A0A0C4DH67 115 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 FAM159BA6NKW6 160 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 CXorf49A8MYA2 514 aaPredicted RBP12.78□□□□□ -0.36
COMMD1-206ENST00000458337 C1QL1O75973 258 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 FURINP09958 794 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 SFTPCP11686 197 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 CMPK1P30085 196 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 RPA3P35244 121 aaPredicted RBP12.78□□□□□ -0.36
COMMD1-206ENST00000458337 ARSFP54793 590 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 GPX6P59796 221 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 ABATP80404 500 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 SLC7A5Q01650 507 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 SP140Q13342 867 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 LY6DQ14210 128 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 TCTE1Q5JU00 501 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 YOD1Q5VVQ6 348 aaPredicted RBP12.78□□□□□ -0.36
COMMD1-206ENST00000458337 ZNF425Q6IV72 752 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 SYVN1Q86TM6 617 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 PAQR7Q86WK9 346 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 MYO1HQ8N1T3 1032 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 ZNF655Q8N720 491 aaPredicted RBP12.78□□□□□ -0.36
COMMD1-206ENST00000458337 GPATCH11Q8N954 259 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 PROKR1Q8TCW9 393 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 LINGO1Q96FE5 620 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 PLCD4Q9BRC7 762 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 DPH7Q9BTV6 452 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 ACAT2Q9BWD1 397 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 RHOJQ9H4E5 214 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 SLC6A20Q9NP91 592 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 ZDHHC18Q9NUE0 388 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 GEMIN8Q9NWZ8 242 aaKnown RBP12.78□□□□□ -0.36
COMMD1-206ENST00000458337 SRPK3Q9UPE1 567 aa12.78□□□□□ -0.36
COMMD1-206ENST00000458337 ZNF462Q96JM2 2506 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 TCRBV9S1A1TA0A576 114 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 EIF4E1BA6NMX2 242 aaKnown RBP12.77□□□□□ -0.37
COMMD1-206ENST00000458337 SYF2O95926 243 aaKnown RBP12.77□□□□□ -0.37
COMMD1-206ENST00000458337 PRB1P04280 392 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 CD63P08962 238 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 PRKAR1AP10644 381 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 AGXTP21549 392 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 MAGEA4P43358 317 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 CCR10P46092 362 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 PGGT1BP53609 377 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 TAS2R39P59534 338 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 DCDP81605 110 aaKnown RBP12.77□□□□□ -0.37
COMMD1-206ENST00000458337 PDAP1Q13442 181 aaKnown RBP12.77□□□□□ -0.37
COMMD1-206ENST00000458337 ERV3-1Q14264 604 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 UGT8Q16880 541 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 ZXDCQ2QGD7 858 aaPredicted RBP12.77□□□□□ -0.37
COMMD1-206ENST00000458337 PTCHD3Q3KNS1 767 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 ATP1A1-AS1Q5TC04 95 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 ICE2Q659A1 982 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 C8orf74Q6P047 294 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 C16orf46Q6P387 395 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 FAM198BQ6UWH4 519 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 RNF44Q7L0R7 432 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 PPFIBP2Q8ND30 876 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 APOBEC4Q8WW27 367 aaKnown RBP12.77□□□□□ -0.37
COMMD1-206ENST00000458337 ZNF592Q92610 1267 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 C17orf62Q9BQA9 187 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 ARHGAP9Q9BRR9 750 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 NDC1Q9BTX1 674 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 DHRS4Q9BTZ2 278 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 SLC7A5P2Q9GIP4 190 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 ADNPQ9H2P0 1102 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 LRRC4CQ9HCJ2 640 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 MRPS30Q9NP92 439 aaKnown RBP12.77□□□□□ -0.37
COMMD1-206ENST00000458337 STOX2Q9P2F5 926 aaPredicted RBP12.77□□□□□ -0.37
COMMD1-206ENST00000458337 TUBD1Q9UJT1 453 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 TCFL5Q9UL49 500 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 SNX7Q9UNH6 387 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 NOVA2Q9UNW9 492 aaKnown RBP12.77□□□□□ -0.37
COMMD1-206ENST00000458337 KCNMB2Q9Y691 235 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 MED13Q9UHV7 2174 aa12.77□□□□□ -0.37
COMMD1-206ENST00000458337 LOC105369274A0A096LPK9 316 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 LOC102723532A0A0G2JNH3 316 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 FAM95CA0A1B0GW59 222 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 NRP2O60462 931 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 KLF7O75840 302 aaPredicted RBP12.76□□□□□ -0.37
COMMD1-206ENST00000458337 CCNDBP1O95273 360 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 WISP3O95389 354 aaPredicted RBP12.76□□□□□ -0.37
COMMD1-206ENST00000458337 FAM87AP0C7U9 286 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 ZNF37AP17032 561 aaPredicted RBP12.76□□□□□ -0.37
COMMD1-206ENST00000458337 HRH2P25021 359 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 EMP3P54852 163 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 AP1S2P56377 157 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 RPS18P62269 152 aaKnown RBP12.76□□□□□ -0.37
COMMD1-206ENST00000458337 POU4F1Q01851 419 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 GRM7Q14831 915 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 PHKG1Q16816 387 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 DEFB109BQ30KR1 87 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 FAM214AQ32MH5 1076 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 NKAIN1Q4KMZ8 207 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 GLE1Q53GS7 698 aaKnown RBP12.76□□□□□ -0.37
COMMD1-206ENST00000458337 WASHC2DQ5SRD0 308 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 FRMPD2BQ6IN97 320 aa12.76□□□□□ -0.37
COMMD1-206ENST00000458337 MRPL14Q6P1L8 145 aaKnown RBP12.76□□□□□ -0.37
COMMD1-206ENST00000458337 AGTRAPQ6RW13 159 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms