RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 LRRTM2O43300 516 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 ALOX12BO75342 701 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 USP1O94782 785 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 ERVK-10P10266 1014 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 NPY2RP49146 381 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 KLC1Q07866 573 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 ATG9BQ674R7 924 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 MYO7BQ6PIF6 2116 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 RNF44Q7L0R7 432 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 SDCCAG8Q86SQ7 713 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-220ENST00000458038 LDB1Q86U70 411 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-220ENST00000458038 SLC13A5Q86YT5 568 aaPredicted RBP20.55■□□□□ 0.88
CPNE1-220ENST00000458038 KBTBD2Q8IY47 623 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 BCORP1Q8N888 145 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 MVB12AQ96EY5 273 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 MIPEPQ99797 713 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 ZFYVE21Q9BQ24 234 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 TREX1Q9NSU2 369 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 BFARQ9NZS9 450 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 C3orf18Q9UK00 162 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 OSGIN2Q9Y236 505 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 MAU2Q9Y6X3 613 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 A0A0J9YVX5 310 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 H3BMM5 538 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 E2F3O00716 465 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 ATP5DP30049 168 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 CMPK1P30085 196 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 FRMPD2BQ6IN97 320 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 MRNIPQ6NTE8 343 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 NDUFAF7Q7L592 441 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 C1orf54Q8WWF1 131 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 TCF12Q99081 682 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 TRIM56Q9BRZ2 755 aaKnown RBP20.54■□□□□ 0.88
CPNE1-220ENST00000458038 UTP6Q9NYH9 597 aaKnown RBP20.54■□□□□ 0.88
CPNE1-220ENST00000458038 DRG1Q9Y295 367 aaKnown RBP20.54■□□□□ 0.88
CPNE1-220ENST00000458038 NFS1Q9Y697 457 aa20.54■□□□□ 0.88
CPNE1-220ENST00000458038 DYTNA2CJ06 578 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 OR2A25A4D2G3 310 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 VPS26AO75436 327 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 MATN4O95460 622 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 STSP08842 583 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 FBLP22087 321 aaKnown RBP20.53■□□□□ 0.88
CPNE1-220ENST00000458038 CXCR2P25025 360 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 AP2B1P63010 937 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 Q0VFX4 171 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 INAQ16352 499 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 RNF187Q5TA31 235 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-220ENST00000458038 METTL27Q8N6F8 245 aaPredicted RBP20.53■□□□□ 0.88
CPNE1-220ENST00000458038 SLX1AQ9BQ83 275 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 OLAHQ9NV23 265 aa20.53■□□□□ 0.88
CPNE1-220ENST00000458038 LOC105369274A0A096LPK9 316 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 NSG1A0A0A6YYJ2 146 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 LOC102723532A0A0G2JNH3 316 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 A0A1W2PPV9 198 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 A0A1W2PQ72 361 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 KLHL18O94889 574 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 EIF2S1P05198 315 aaKnown RBP20.52■□□□□ 0.88
CPNE1-220ENST00000458038 ETS1P14921 441 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 PSMB5P28074 263 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 HSD17B2P37059 387 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 BDKRB1P46663 353 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 ADARP55265 1226 aaKnown RBP20.52■□□□□ 0.88
CPNE1-220ENST00000458038 EIF3BP55884 814 aaKnown RBP20.52■□□□□ 0.88
CPNE1-220ENST00000458038 SESN2P58004 480 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-220ENST00000458038 CDK16Q00536 496 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 SNX1Q13596 522 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 ARHGAP19Q14CB8 494 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 ZRSR2Q15696 482 aaKnown RBP20.52■□□□□ 0.88
CPNE1-220ENST00000458038 CCNG2Q16589 344 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 PRTGQ2VWP7 1150 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 ANKRD20A4Q4UJ75 823 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 ARMC3Q5W041 872 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 FBXO42Q6P3S6 717 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 DRICH1Q6PGQ1 229 aaPredicted RBP20.52■□□□□ 0.88
CPNE1-220ENST00000458038 LINC00696Q6ZRV3 163 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 RIPOR1Q6ZS17 1223 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 TMEM139Q8IV31 216 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 OR4N4Q8N0Y3 316 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 SMPDL3AQ92484 453 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 DPH7Q9BTV6 452 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 ZNF160Q9HCG1 818 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 C14orf105Q9NVL8 296 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 CAPN6Q9Y6Q1 641 aa20.52■□□□□ 0.88
CPNE1-220ENST00000458038 APCP25054 2843 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 TRAV17A0A0B4J275 112 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 ZNF839A8K0R7 811 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 TXNDC9O14530 226 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 HNRNPRO43390 633 aaKnown RBP20.51■□□□□ 0.87
CPNE1-220ENST00000458038 MED26O95402 600 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 PKMP14618 531 aaKnown RBP20.51■□□□□ 0.87
CPNE1-220ENST00000458038 RPL22P35268 128 aaKnown RBP20.51■□□□□ 0.87
CPNE1-220ENST00000458038 EMP2P54851 167 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 ARG2P78540 354 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 RELAQ04206 551 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 DSG2Q14126 1118 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 GBX1Q14549 363 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 CCSMST1Q4G0I0 132 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 GARNL3Q5VVW2 1013 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 CNSTQ6PJW8 725 aa20.51■□□□□ 0.87
CPNE1-220ENST00000458038 OTUD6BQ8N6M0 293 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms