RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 C5orf22Q49AR2 442 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 CPTPQ5TA50 214 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 HMGN2P46Q86SG4 172 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 ADHFE1Q8IWW8 467 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 CHPFQ8IZ52 775 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 REXO5Q96IC2 774 aaKnown RBP11.63□□□□□ -0.55
SMPD4-213ENST00000454468 ACTL8Q9H568 366 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 DEC1Q9P2X7 70 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 VPS29Q9UBQ0 182 aa11.63□□□□□ -0.55
SMPD4-213ENST00000454468 TRPM7Q96QT4 1865 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 A0A1W2PPW3 197 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 KPNA5O15131 536 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 STT3AP46977 705 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 OR1E2P47887 323 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 RPS13P62277 151 aaKnown RBP11.62□□□□□ -0.55
SMPD4-213ENST00000454468 ILF2Q12905 390 aaKnown RBP11.62□□□□□ -0.55
SMPD4-213ENST00000454468 CATSPEREQ5SY80 951 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 XKR5Q6UX68 686 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 NANOGNBQ7Z5D8 188 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 ANKFN1Q8N957 763 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 SUSD6Q92537 303 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 SGCDQ92629 289 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 NELL1Q92832 810 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF583Q96ND8 569 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 NAA50Q9GZZ1 169 aaKnown RBP11.62□□□□□ -0.55
SMPD4-213ENST00000454468 AASDHPPTQ9NRN7 309 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 PDP1Q9P0J1 537 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-213ENST00000454468 ACSL6Q9UKU0 697 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 TESMINQ9Y4I5 508 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF236Q9UL36 1845 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 PDZK1P1A8MUH7 402 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 TMX2-CTNND1H3BSU7 103 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 H7C0S8 307 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 TOR1BO14657 336 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 LAMP1P11279 417 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 SDC1P18827 310 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 PTGER1P34995 402 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 SLC6A11P48066 632 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 DAG1Q14118 895 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 HIST2H2ACQ16777 129 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-213ENST00000454468 HIST2H2AA3Q6FI13 130 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 DLEU7Q6UYE1 221 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 MACC1Q6ZN28 852 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 FAM124AQ86V42 546 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 PDPRQ8NCN5 879 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 TFAP2CQ92754 450 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 OTUB1Q96FW1 271 aaPredicted RBP11.62□□□□□ -0.55
SMPD4-213ENST00000454468 NRTNQ99748 197 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 ARMC1Q9NVT9 282 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 RTCAO00442 366 aaKnown RBP11.62□□□□□ -0.55
SMPD4-213ENST00000454468 WNT9AO14904 365 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 VILLO15195 856 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 C8GP07360 202 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 TCF3P15923 654 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 VIPR1P32241 457 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 MYBPC3Q14896 1274 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 USP39Q53GS9 565 aaKnown RBP11.62□□□□□ -0.55
SMPD4-213ENST00000454468 YAF2Q8IY57 180 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 C7orf61Q8IZ16 206 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 TAGAPQ8N103 731 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 OR4A15Q8NGL6 344 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 PADI4Q9UM07 663 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 INSL6Q9Y581 213 aa11.62□□□□□ -0.55
SMPD4-213ENST00000454468 ARHGEF33A8MVX0 844 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 RECQL5O94762 991 aaPredicted RBP11.61□□□□□ -0.55
SMPD4-213ENST00000454468 CXCL10P02778 98 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 CEBPBP17676 345 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 HTR1EP28566 365 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 RAD23AP54725 363 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 SEC13P55735 322 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 RPL26P61254 145 aaKnown RBP11.61□□□□□ -0.55
SMPD4-213ENST00000454468 C2orf80Q0P641 193 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 SFSWAPQ12872 951 aaKnown RBP11.61□□□□□ -0.55
SMPD4-213ENST00000454468 KCNAB2Q13303 367 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 SLBPQ14493 270 aaKnown RBP eCLIP11.61□□□□□ -0.55
SMPD4-213ENST00000454468 PON2Q15165 354 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 KCTD21Q4G0X4 260 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 NHSL2Q5HYW2 709 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 SMYD1Q8NB12 490 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 CNIH3Q8TBE1 160 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 SORBS1Q9BX66 1292 aaKnown RBP11.61□□□□□ -0.55
SMPD4-213ENST00000454468 TBX21Q9UL17 535 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 K7ESM1 405 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 NUDT7P0C024 238 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 HSMCR30P0CW71 290 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 MC1RQ01726 317 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 GRM2Q14416 872 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 ADRM1Q16186 407 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 Q6ZNB5 142 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 METTL3Q86U44 580 aaKnown RBP11.61□□□□□ -0.55
SMPD4-213ENST00000454468 HHIPL1Q96JK4 782 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 BRINP2Q9C0B6 783 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 C5AR2Q9P296 337 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 RAB23Q9ULC3 237 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 MYO10Q9HD67 2058 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 TULP3O75386 442 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 POP7O75817 140 aaKnown RBP11.61□□□□□ -0.55
SMPD4-213ENST00000454468 UMPSP11172 480 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 AGXTP21549 392 aa11.61□□□□□ -0.55
SMPD4-213ENST00000454468 AOAHP28039 575 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms