RNA–Protein interactions for RNA: ENST00000447745.5

CTDSPL-207, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-207ENST00000447745 KCND3Q9UK17 655 aa9.73□□□□□ -0.85
CTDSPL-207ENST00000447745 PDE10AQ9Y233 779 aa9.73□□□□□ -0.85
CTDSPL-207ENST00000447745 KLK4Q9Y5K2 254 aa9.73□□□□□ -0.85
CTDSPL-207ENST00000447745 MRPS18BQ9Y676 258 aaKnown RBP9.73□□□□□ -0.85
CTDSPL-207ENST00000447745 AP1M2Q9Y6Q5 423 aa9.73□□□□□ -0.85
CTDSPL-207ENST00000447745 FAM95CA0A1B0GW59 222 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 FAM159BA6NKW6 160 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 MAP2K7O14733 419 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 ATXN7O15265 892 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 RRP9O43818 475 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 CTSVO60911 334 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 C1QAP02745 245 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 PRKAR1AP10644 381 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 IMPA1P29218 277 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 CMPK1P30085 196 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 RORAP35398 523 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 MC1RQ01726 317 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 PRDX1Q06830 199 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 TBR1Q16650 682 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 TAF1BQ53T94 588 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 ZC3H12BQ5HYM0 836 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 LCN10Q6JVE6 187 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 C16orf46Q6P387 395 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 FBXO42Q6P3S6 717 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 TLDC1Q6P9B6 456 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 ZNF517Q6ZMY9 492 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 IFT20Q8IY31 132 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 LRRC56Q8IYG6 542 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 ZNF655Q8N720 491 aaPredicted RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 LSM14AQ8ND56 463 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 IFT81Q8WYA0 676 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 STARD8Q92502 1023 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 WBP1Q96G27 269 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 PDLIM5Q96HC4 596 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 RUFY1Q96T51 708 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 DPH7Q9BTV6 452 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 GPR87Q9BY21 358 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 FUT8Q9BYC5 575 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 IRAK4Q9NWZ3 460 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 TXNDC16Q9P2K2 825 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 FARSAQ9Y285 508 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 MTO1Q9Y2Z2 717 aaKnown RBP9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 PCDHGA6Q9Y5G7 932 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 SEC16AO15027 2179 aa9.72□□□□□ -0.85
CTDSPL-207ENST00000447745 PIEZO2Q9H5I5 2752 aa9.71□□□□□ -0.85
CTDSPL-207ENST00000447745 C21orf140B9A014 251 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 ZSCAN9O15535 394 aaPredicted RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 NRP2O60462 931 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 SRPX2O60687 465 aaPredicted RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 CREG1O75629 220 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 CCNDBP1O95273 360 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 ITGB2P05107 769 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 HIST1H2AGP0C0S8 130 aaPredicted RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 HIST1H2ADP20671 130 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 PTPN4P29074 926 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 SLC12A2P55011 1212 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 RPS15P62841 145 aaKnown RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 ILF2Q12905 390 aaKnown RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 SP140Q13342 867 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 COL9A2Q14055 689 aaPredicted RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 ERV3-1Q14264 604 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 ZNF460Q14592 562 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 PHKG1Q16816 387 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 PTCHD3Q3KNS1 767 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 LINC00303Q3SY05 128 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 KBTBD12Q3ZCT8 623 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 CRTC2Q53ET0 693 aaPredicted RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 THEMIS2Q5TEJ8 643 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 C1orf189Q5VU69 101 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 ICE2Q659A1 982 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 RHBDD2Q6NTF9 364 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 AGTRAPQ6RW13 159 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 MBOAT1Q6ZNC8 495 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 HDXQ7Z353 690 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 CEP97Q8IW35 865 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 CTAGE3PQ8IX95 158 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 NKAPQ8N5F7 415 aaKnown RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 PPM1NQ8N819 430 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 FBF1Q8TES7 1133 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 SLC39A7Q92504 469 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 EXTL1Q92935 676 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 VPS39Q96JC1 886 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 HIST1H2AHQ96KK5 128 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 CPNE1Q99829 537 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 HIST1H2AJQ99878 128 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 DPH2Q9BQC3 489 aaPredicted RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 SELENOSQ9BQE4 189 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 H2AFJQ9BTM1 129 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 TRIM54Q9BYV2 358 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 ATG10Q9H0Y0 220 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 VIPAS39Q9H9C1 493 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 SLC6A20Q9NP91 592 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 MRPS30Q9NP92 439 aaKnown RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 STARD5Q9NSY2 213 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 STOX2Q9P2F5 926 aaPredicted RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 TAC3Q9UHF0 121 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 IKZF3Q9UKT9 509 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 SMG1Q96Q15 3661 aaKnown RBP9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 KALRNO60229 2985 aa9.71□□□□□ -0.86
CTDSPL-207ENST00000447745 LOC105369274A0A096LPK9 316 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms