RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SPTBP11277 2137 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 FGF3P11487 239 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 PVRP15151 417 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 NPPBP16860 134 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 CSRP1P21291 193 aaKnown RBP17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 CCND1P24385 295 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 CCR10P46092 362 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 NAGLUP54802 743 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 CDH13P55290 713 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 CLDN6P56747 220 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 DNAJB13P59910 316 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 CDC16Q13042 620 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 GTF2H2Q13888 395 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 PDK4Q16654 411 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 KIAA1614Q5VZ46 1190 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 ICE2Q659A1 982 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 GTF2H2CQ6P1K8 395 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 LCTLQ6UWM7 567 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 GLRX5Q86SX6 157 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 SLCO6A1Q86UG4 719 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 ALYREFQ86V81 257 aaKnown RBP17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 OR2L3Q8NG85 312 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 ZNF483Q8TF39 744 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 L3HYPDHQ96EM0 354 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 GFM1Q96RP9 751 aaKnown RBP17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 MAP3K3Q99759 626 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 SLC6A20Q9NP91 592 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 CUEDC1Q9NWM3 386 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 EPHA6Q9UF33 1036 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 DYRK1BQ9Y463 629 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 ANGPTL3Q9Y5C1 460 aa17.34■□□□□ 0.37
TRAPPC4-203ENST00000447216 MN1Q10571 1320 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 NTN3O00634 580 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 BIRC5O15392 142 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 CPNE6O95741 557 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 CDH1P12830 882 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 EPORP19235 508 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 BGNP21810 368 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 CDH3P22223 829 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 NOVA1P51513 510 aaKnown RBP17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 SQSTM1Q13501 440 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 SLC5A12Q1EHB4 618 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 CES4AQ5XG92 561 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 WDR74Q6RFH5 385 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 ZNF574Q6ZN55 896 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 C17orf64Q86WR6 236 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 PLXDC1Q8IUK5 500 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 PPP4R1Q8TF05 950 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 NEIL2Q969S2 332 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 SLC22A18Q96BI1 424 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 FAM122AQ96E09 287 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 ZDHHC12Q96GR4 267 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 HAUS8Q9BT25 410 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 RAB33BQ9H082 229 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 ZBTB26Q9HCK0 441 aa17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 MRPS30Q9NP92 439 aaKnown RBP17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 SEMA4BQ9NPR2 832 aaPredicted RBP17.33■□□□□ 0.36
TRAPPC4-203ENST00000447216 PTPRBP23467 1997 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 A0A0J9YY10 115 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 A8MU76 341 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 D6RAR5 112 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 E7EQ34 232 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 MATN2O00339 956 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 PPP6CO00743 305 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 NRP2O60462 931 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 PRAMEF10O60809 474 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 PRAMEF4O60810 478 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 C9P02748 559 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 FTH1P19P0C7X4 201 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 NEFHP12036 1026 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 CMPK1P30085 196 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 SIM1P81133 766 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 PRDX1Q06830 199 aaKnown RBP17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 ILKQ13418 452 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 SPIDRQ14159 915 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 CHI3L2Q15782 390 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 RBBP7Q16576 425 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 CFAP157Q5JU67 520 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 CATSPEREQ5SY80 951 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 PRAMEF9Q5VWM5 478 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 FAM219BQ5XKK7 198 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 TMEM71Q6P5X7 295 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 PPP1R14CQ8TAE6 165 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 TRPC4APQ8TEL6 797 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 SLC5A11Q8WWX8 675 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 C1QTNF3Q9BXJ4 246 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 PCBD2Q9H0N5 130 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 SEMA6CQ9H3T2 930 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 GSTO2Q9H4Y5 243 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 INTS9Q9NV88 658 aaKnown RBP17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 KCNE2Q9Y6J6 123 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 CFAP54Q96N23 3096 aa17.32■□□□□ 0.36
TRAPPC4-203ENST00000447216 IGHV5-51A0A0C4DH38 117 aa17.31■□□□□ 0.36
TRAPPC4-203ENST00000447216 IGKV1-8A0A0C4DH67 115 aa17.31■□□□□ 0.36
TRAPPC4-203ENST00000447216 TLCD2A6NGC4 264 aa17.31■□□□□ 0.36
TRAPPC4-203ENST00000447216 SLC9B1P1A6NJY1 282 aa17.31■□□□□ 0.36
TRAPPC4-203ENST00000447216 AGRPO00253 132 aa17.31■□□□□ 0.36
TRAPPC4-203ENST00000447216 OR7A17O14581 309 aa17.31■□□□□ 0.36
TRAPPC4-203ENST00000447216 RASSF9O75901 435 aa17.31■□□□□ 0.36
TRAPPC4-203ENST00000447216 CCNDBP1O95273 360 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms