RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 FTMTQ8N4E7 242 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ASB6Q9NWX5 421 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 MEMO1Q9Y316 297 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TRBV23OR9-2A0A075B6M9 112 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 BLACEA4D250 179 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ABLIM1O14639 778 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 KAT7O95251 611 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 HLA-DQB2P05538 268 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 BMP6P22004 513 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ALDH3A2P51648 485 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 GTF2IRD2BQ6EKJ0 949 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ADNP2Q6IQ32 1131 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 C17orf99Q6UX52 265 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 GTF2IRD2Q86UP8 949 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 LRRC17Q8N6Y2 441 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 CMKLR1Q99788 373 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 HAS3O00219 553 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 MAP2K7O14733 419 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 SEC24AO95486 1093 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 VNN1O95497 513 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 KLF8O95600 359 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 PREPP48147 710 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 RAB28P51157 221 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 PLA2G16P53816 162 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 MED22Q15528 200 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ARL13AQ5H913 290 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 ANO7Q6IWH7 933 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 C3P1Q6ZMU1 363 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 Q6ZVU0 165 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TESCQ96BS2 214 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 FCRL4Q96PJ5 515 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 LRRC3Q9BY71 257 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 PDP1Q9P0J1 537 aaPredicted RBP8.34□□□□□ -1.07
PTPN3-204ENST00000446349 TSC22D4Q9Y3Q8 395 aa8.34□□□□□ -1.07
PTPN3-204ENST00000446349 NPIPA5E9PKD4 350 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 PSIP1O75475 530 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 RPA4Q13156 261 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CHRNA6Q15825 494 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CIR1Q86X95 450 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TREML1Q86YW5 311 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 SLC34A3Q8N130 599 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 PQLC1Q8N2U9 271 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 IPCEF1Q8WWN9 437 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 KCNJ9Q92806 393 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TOP1MTQ969P6 601 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CCSER2Q9H7U1 834 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 NLE1Q9NVX2 485 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 NPIPA1Q9UND3 350 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 WNT6Q9Y6F9 365 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 GADD45GO95257 159 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF20P17024 532 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 HSD11B1P28845 292 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 DSTNP60981 165 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 EIF5AP63241 154 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 RUNX3Q13761 415 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 PYDC2Q56P42 97 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 IL22RA1Q8N6P7 574 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CENPNQ96H22 339 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 EVA1AQ9H8M9 152 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 APOBEC3GQ9HC16 384 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ZCCHC3Q9NUD5 404 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 RPL36Q9Y3U8 105 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 BTAF1O14981 1849 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TCRBV21S2A2A0A5A6 115 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 PROM1O43490 865 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 AHSA1O95433 338 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 NIPAL4Q0D2K0 466 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 SLC10A7Q0GE19 358 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 SGCDQ92629 289 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 BADQ92934 168 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 NPY6RQ99463 290 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CST11Q9H112 138 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CHMP1AQ9HD42 196 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 OSER1Q9NX31 292 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 WASF3Q9UPY6 502 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CAPN5O15484 640 aaPredicted RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CYP11A1P05108 521 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ITIH1P19827 911 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ACY1Q03154 408 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ST3GAL3Q11203 375 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 KIAA0319Q5VV43 1072 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 KLHDC10Q6PID8 442 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 OLFML1Q6UWY5 402 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 FAM86B1Q8N7N1 296 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TSPEARQ8WU66 669 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 TBC1D10AQ9BXI6 508 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 DGCR6LQ9BY27 220 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 NLGN3Q9NZ94 848 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ATP6AP2A0A1C7CYW4 349 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ERI3O43414 337 aaKnown RBP8.33□□□□□ -1.08
PTPN3-204ENST00000446349 SSNA1O43805 119 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ITGA10O75578 1167 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 ATP6AP2O75787 350 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 CBX6O95503 412 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 SLC1A2P43004 574 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 KCNC1P48547 511 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 SLC8B1Q6J4K2 584 aa8.33□□□□□ -1.08
PTPN3-204ENST00000446349 RAB43Q86YS6 212 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms