RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 CNTNAP4Q9C0A0 1308 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 ZNF541Q9H0D2 1346 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 FRMPD1Q5SYB0 1578 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 GMDSO60547 372 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 CLDN9O95484 217 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 ARL9Q6T311 187 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 KLHL36Q8N4N3 616 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 SAMD12Q8N8I0 201 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 C3orf58Q8NDZ4 430 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 SLC29A3Q9BZD2 475 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 SLC2A6Q9UGQ3 507 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 KLHL21Q9UJP4 597 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 GPX3P22352 226 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 CA5AP35218 305 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 SIDT2Q8NBJ9 832 aaKnown RBP7.69□□□□□ -1.18
SMG1-202ENST00000446231 RTP4Q96DX8 246 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 TMEM185BQ9H7F4 350 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 EFNA1P20827 205 aaPredicted RBP7.69□□□□□ -1.18
SMG1-202ENST00000446231 UBA1P22314 1058 aaKnown RBP7.69□□□□□ -1.18
SMG1-202ENST00000446231 BDNFP23560 247 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 CD300CQ08708 224 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 DSC3Q14574 896 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 STOML3Q8TAV4 291 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 RHBDF1Q96CC6 855 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 PRMT6Q96LA8 375 aaPredicted RBP7.69□□□□□ -1.18
SMG1-202ENST00000446231 POLR1EQ9GZS1 481 aaKnown RBP7.69□□□□□ -1.18
SMG1-202ENST00000446231 XKR8Q9H6D3 395 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 TBC1D24Q9ULP9 559 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 STUB1Q9UNE7 303 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 INSRRP14616 1297 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 NPRL3Q12980 569 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 C10orf62Q5T681 223 aaPredicted RBP7.69□□□□□ -1.18
SMG1-202ENST00000446231 PEG10Q86TG7 708 aaKnown RBP7.69□□□□□ -1.18
SMG1-202ENST00000446231 CHPFQ8IZ52 775 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 ZBTB44Q8NCP5 570 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 FBXW11Q9UKB1 542 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 SPO11Q9Y5K1 396 aa7.69□□□□□ -1.18
SMG1-202ENST00000446231 PIM1P11309 404 aaPredicted RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 ZNF14P17017 642 aaPredicted RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 AGXTP21549 392 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 ZNF438Q7Z4V0 828 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 GHDCQ8N2G8 530 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 AKIP1Q9NQ31 210 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 GABRDO14764 452 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 PCDH1Q08174 1060 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 KCNA10Q16322 511 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 TOP6BLQ8N6T0 577 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 SENP8Q96LD8 212 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 BBS4Q96RK4 519 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 NLKQ9UBE8 527 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 NUPL2O15504 423 aaKnown RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 SIX3O95343 332 aaPredicted RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 TAS2R3Q9NYW6 316 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 NDUFAF4Q9P032 175 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 POLEQ07864 2286 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CST3P01034 146 aaPredicted RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 KRT77Q7Z794 578 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 TWNKQ96RR1 684 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 SLC9A7Q96T83 725 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 C2orf74A8MZ97 194 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 NAE1Q13564 534 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CNIH2Q6PI25 160 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CARNMT1Q8N4J0 409 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 ZNF350Q9GZX5 532 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 ZNF334Q9HCZ1 680 aaPredicted RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 FKBP7Q9Y680 259 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 OR6C74A6NCV1 312 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 SLC26A2P50443 739 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 TREML2Q5T2D2 321 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 DCLRE1AQ6PJP8 1040 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CEP97Q8IW35 865 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 MAFIPQ8WZ33 124 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 MGME1Q9BQP7 344 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 NEURL2Q9BR09 285 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 RPS6KB2Q9UBS0 482 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 SLC25A13Q9UJS0 675 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 PCDHB5Q9Y5E4 795 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 FAM86C2PA6NEL3 165 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 MID1O15344 667 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 SHMT2P34897 504 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 GDPGP1Q6ZNW5 385 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 KCNA7Q96RP8 456 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 MRM3Q9HC36 420 aaKnown RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 CLCA1A8K7I4 914 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CLIC1O00299 241 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 KANK2Q63ZY3 851 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 ABHD15Q6UXT9 468 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 LINC00299Q6ZSB3 139 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 PLPPR4Q7Z2D5 763 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 C1orf127Q8N9H9 656 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 B3GNT2Q9NY97 397 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 L7N2F9 121 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 CHRNA4P43681 627 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 INAVAQ3KP66 663 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 ARMC12Q5T9G4 340 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 RPS27LQ71UM5 84 aaKnown RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 DNAJB7Q7Z6W7 309 aaPredicted RBP7.68□□□□□ -1.18
SMG1-202ENST00000446231 SLC30A8Q8IWU4 369 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 KLHL6Q8WZ60 621 aa7.68□□□□□ -1.18
SMG1-202ENST00000446231 OMPP47874 163 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms