RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 GOLGA8TH3BQL2 631 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 ZNF749O43361 778 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 HBQ1P09105 142 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 NMBRP28336 390 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 RAB28P51157 221 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 TLE1Q04724 770 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 DEFB110Q30KQ9 67 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 PTCHD3Q3KNS1 767 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 MSS51Q4VC12 460 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 SPANXN3Q5MJ09 141 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 CES3Q6UWW8 571 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 CDHR3Q6ZTQ4 885 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 DSELQ8IZU8 1212 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 MPP5Q8N3R9 675 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 C2orf73Q8N5S3 287 aaPredicted RBP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 ENDOVQ8N8Q3 282 aaKnown RBP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 THAP4Q8WY91 577 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 ZNF669Q96BR6 464 aaPredicted RBP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 ANAPC16Q96DE5 110 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 MFSD3Q96ES6 412 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 SIGLEC10Q96LC7 697 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 LRFN5Q96NI6 719 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 OR2A14Q96R47 310 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 NINJ2Q9NZG7 142 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 ANAPC2Q9UJX6 822 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 A0A087WUV0 522 aaPredicted RBP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 A0A0J9YY10 115 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 KPNA5O15131 536 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 BANF1O75531 89 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 USP1O94782 785 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 ACSL3O95573 720 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 ABHD2P08910 425 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 MSL3P1P0C860 447 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 CSRP3P50461 194 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 KIR2DS3Q14952 304 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 FASTKD3Q14CZ7 662 aaKnown RBP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 HP1BP3Q5SSJ5 553 aaPredicted RBP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 PLEKHS1Q5SXH7 462 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 BEND6Q5SZJ8 279 aaPredicted RBP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 TAX1BP1Q86VP1 789 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 VRK3Q8IV63 474 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 DCUN1D3Q8IWE4 304 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 RAB42Q8N4Z0 105 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 FAM169BQ8N8A8 192 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 LKAAEAR1Q8TD35 194 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 ANKRD7Q92527 254 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 SLC22A18Q96BI1 424 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 FOPNLQ96NB1 174 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 CCDC77Q9BR77 488 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 KIFC1Q9BW19 673 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 NLNQ9BYT8 704 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 FAM60AQ9NP50 221 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 ACSS2Q9NR19 701 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 TREX1Q9NSU2 369 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 PCMTD2Q9NV79 361 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 TP53TG5Q9Y2B4 290 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 AP1M2Q9Y6Q5 423 aa8.44□□□□□ -1.06
USP6NL-203ENST00000443016 SPENQ96T58 3664 aaKnown RBP8.44□□□□□ -1.06
USP6NL-203ENST00000443016 RIPK2O43353 540 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 GPC4O75487 556 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 DNAJB5O75953 348 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 CHRM3P20309 590 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 CD9P21926 228 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 AOAHP28039 575 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 CRYMQ14894 314 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 SF1Q15637 639 aaKnown RBP8.43□□□□□ -1.06
USP6NL-203ENST00000443016 UGT8Q16880 541 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 MLIPQ5VWP3 458 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 ZNF517Q6ZMY9 492 aaPredicted RBP8.43□□□□□ -1.06
USP6NL-203ENST00000443016 HDXQ7Z353 690 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 LRRC6Q86X45 466 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 CDKL2Q92772 493 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 FAM136AQ96C01 138 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 C17orf62Q9BQA9 187 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 DPH2Q9BQC3 489 aaPredicted RBP8.43□□□□□ -1.06
USP6NL-203ENST00000443016 TXLNGYQ9BZA5 131 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 TXLNGQ9NUQ3 528 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 TSR3Q9UJK0 312 aaKnown RBP8.43□□□□□ -1.06
USP6NL-203ENST00000443016 TLK1Q9UKI8 766 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 TCFL5Q9UL49 500 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 PADI2Q9Y2J8 665 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 PTPN13Q12923 2485 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 ARGFXA6NJG6 315 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 E5RI56 91 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 SLCO2B1O94956 709 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 NR1D1P20393 614 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 MAGP20916 626 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 FMO4P31512 558 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 HSD17B3P37058 310 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 IFFO1Q0D2I5 559 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 IL10RAQ13651 578 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 KYNUQ16719 465 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 KLHL38Q2WGJ6 581 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 CCDC92Q53HC0 331 aaPredicted RBP8.43□□□□□ -1.06
USP6NL-203ENST00000443016 C1orf189Q5VU69 101 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 STEAP4Q687X5 459 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 TCTN3Q6NUS6 607 aa8.43□□□□□ -1.06
USP6NL-203ENST00000443016 CNSTQ6PJW8 725 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms