RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 RPL6Q02878 288 aaKnown RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 UBAP2LQ14157 1087 aaKnown RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 RHEBQ15382 184 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 THAP6Q8TBB0 222 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 PRODH2Q9UF12 536 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 RIMS1Q86UR5 1692 aaKnown RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 ANKRD34BA5PLL1 514 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 IFNGR1P15260 489 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 MATN1P21941 496 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 NWD1Q149M9 1564 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 CRTC2Q53ET0 693 aaPredicted RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 POC1BQ8TC44 478 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 FCGR1BQ92637 280 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 KCNH6Q9H252 994 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 HIPK2Q9H2X6 1198 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 LRRC19Q9H756 370 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 ZCCHC3Q9NUD5 404 aaKnown RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 RPL5P46777 297 aaKnown RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 DSG2Q14126 1118 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 AMIGO2Q86SJ2 522 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 KCNN1Q92952 543 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 TCAF1Q9Y4C2 921 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 VNN2O95498 520 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 CSN2P05814 226 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 GPIP06744 558 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 FHP07954 510 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 CLCNKAP51800 687 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 MAZP56270 477 aaKnown RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 GNG2P59768 71 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 DSC2Q02487 901 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 TREML2Q5T2D2 321 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 SLC39A4Q6P5W5 647 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 PARP8Q8N3A8 854 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 ANKRA2Q9H9E1 313 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 RPH3AQ9Y2J0 694 aaPredicted RBP10.94□□□□□ -0.66
SCN4A-201ENST00000435607 PCDHGC4Q9Y5F7 938 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 MYO3AQ8NEV4 1616 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 SNAPC5O75971 98 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 PET100P0DJ07 73 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 TNFSF4P23510 183 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 GSTM2P28161 218 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 ICAM3P32942 547 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 CRHR1P34998 444 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 HNF1BP35680 557 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 CBLBQ13191 982 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 PKDCCQ504Y2 493 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 CRB2Q5IJ48 1285 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 CYP2U1Q7Z449 544 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 CYP2S1Q96SQ9 504 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 DUSP26Q9BV47 211 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 LACRTQ9GZZ8 138 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 ACSS3Q9H6R3 686 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 FADS3Q9Y5Q0 445 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 PEX16Q9Y5Y5 336 aa10.94□□□□□ -0.66
SCN4A-201ENST00000435607 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 GJE1A6NN92 205 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 B4GALT2O60909 372 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 CHMP24386 653 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 HOXA10P31260 410 aaPredicted RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 DLG4P78352 724 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 SLC10A7Q0GE19 358 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 RCAN2Q14206 197 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 MFSD2AQ8NA29 543 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 DDX4Q9NQI0 724 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZDHHC3Q9NYG2 299 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZSCAN5BA6NJL1 495 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ARVCFO00192 962 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ERI3O43414 337 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 CCL5P13501 91 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 EPCAMP16422 314 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 THBS2P35442 1172 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 PRKCIP41743 596 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 EIF1AXP47813 144 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 AUHQ13825 339 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 PAQR7Q86WK9 346 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 RALGPS2Q86X27 583 aaPredicted RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 DQX1Q8TE96 717 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 SMPDL3AQ92484 453 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 AGAP2Q99490 1192 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF221Q9UK13 617 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 PCDHGB6Q9Y5F9 930 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZBTB11O95625 1053 aaPredicted RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 GOT2P00505 430 aaKnown RBP10.93□□□□□ -0.66
SCN4A-201ENST00000435607 NCK1P16333 377 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 NOMO3P69849 1222 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ARL5BQ96KC2 179 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 UBXN10Q96LJ8 280 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF350Q9GZX5 532 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 NRXN1Q9ULB1 1477 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 INPPL1O15357 1258 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 B4GALT5O43286 388 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 PEPDP12955 493 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 PREPP48147 710 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 FAM76BQ5HYJ3 339 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ZNF280BQ86YH2 543 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 KLRG1Q96E93 195 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 DEFB126Q9BYW3 111 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 SETBP1Q9Y6X0 1596 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 K7EPI3 171 aa10.93□□□□□ -0.66
SCN4A-201ENST00000435607 ADRB2P07550 413 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms