RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 HEATR5BQ9P2D3 2071 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 MYO9AB2RTY4 2548 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 IGLV3-12A0A075B6K2 115 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 A0A0J9YVX5 310 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 A0A1W2PPV9 198 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 MAP2K7O14733 419 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 PRPF4O43172 522 aaKnown RBP eCLIP14.22□□□□□ -0.13
MSH5-208ENST00000429846 ALOX12BO75342 701 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 VPS26AO75436 327 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 MATN4O95460 622 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 CLDN1O95832 211 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 ESR1P03372 595 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 ZSCAN5DPP0CG00 497 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 ERVK-10P10266 1014 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 ERGP11308 486 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 ACPPP15309 386 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 NMBRP28336 390 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 CMPK1P30085 196 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 CRADDP78560 199 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 KLC1Q07866 573 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 GBX1Q14549 363 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 ARHGAP19Q14CB8 494 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 SIX1Q15475 284 aaPredicted RBP14.22□□□□□ -0.13
MSH5-208ENST00000429846 HIF1AQ16665 826 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 CCSMST1Q4G0I0 132 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 CTSL3PQ5NE16 218 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 MEI1Q5TIA1 1274 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 FRMPD2BQ6IN97 320 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 ISLR2Q6UXK2 745 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 SHISA6Q6ZSJ9 500 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 METTL27Q8N6F8 245 aaPredicted RBP14.22□□□□□ -0.13
MSH5-208ENST00000429846 STT3BQ8TCJ2 826 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 LPGAT1Q92604 370 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 MIEF2Q96C03 454 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 MVB12AQ96EY5 273 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 THOC3Q96J01 351 aaKnown RBP14.22□□□□□ -0.13
MSH5-208ENST00000429846 FAM114A2Q9NRY5 505 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 ZC3H7BQ9UGR2 993 aaKnown RBP14.22□□□□□ -0.13
MSH5-208ENST00000429846 RUVBL2Q9Y230 463 aaKnown RBP14.22□□□□□ -0.13
MSH5-208ENST00000429846 VPS9D1Q9Y2B5 631 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 CSAG2Q9Y5P2 127 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 MAU2Q9Y6X3 613 aa14.22□□□□□ -0.13
MSH5-208ENST00000429846 PCDH17O14917 1159 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 USP1O94782 785 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 VAPBO95292 243 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 ZGLP1P0C6A0 271 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 TPSB2P20231 275 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 OGNP20774 298 aaKnown RBP14.21□□□□□ -0.13
MSH5-208ENST00000429846 FDXRP22570 491 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 ARNTP27540 789 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 PER3P56645 1201 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 CDC16Q13042 620 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 MFAP5Q13361 173 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 TPSAB1Q15661 275 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 ANKRD20A4Q4UJ75 823 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 KIAA0930Q6ICG6 404 aaPredicted RBP14.21□□□□□ -0.13
MSH5-208ENST00000429846 LRRC8BQ6P9F7 803 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 GSTA5Q7RTV2 222 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 KCNMB4Q86W47 210 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 PARP9Q8IXQ6 854 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 FAR1Q8WVX9 515 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 SMPDL3AQ92484 453 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 MFSD3Q96ES6 412 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 CNDP1Q96KN2 507 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 LMF1Q96S06 567 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 C14orf105Q9NVL8 296 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 UTP6Q9NYH9 597 aaKnown RBP14.21□□□□□ -0.13
MSH5-208ENST00000429846 SOX13Q9UN79 622 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 CDC14AQ9UNH5 594 aa14.21□□□□□ -0.13
MSH5-208ENST00000429846 CACNA1DQ01668 2161 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 LOC105369274A0A096LPK9 316 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 LOC102723532A0A0G2JNH3 316 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 A0A1W2PQ72 361 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 ZNF839A8K0R7 811 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 MYO1CO00159 1063 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 CCNDBP1O95273 360 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 EDN3P14138 238 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 PAMP19021 973 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 FBLP22087 321 aaKnown RBP14.2□□□□□ -0.14
MSH5-208ENST00000429846 MGAT1P26572 445 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 HSD17B2P37059 387 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 DSG2Q14126 1118 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 PRTGQ2VWP7 1150 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 GARNL3Q5VVW2 1013 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 RPUSD3Q6P087 351 aaKnown RBP14.2□□□□□ -0.14
MSH5-208ENST00000429846 FAM180AQ6UWF9 173 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 OR4N4Q8N0Y3 316 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 OR9A1PQ8NGU1 263 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 GRHL3Q8TE85 626 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 CABS1Q96KC9 395 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 C10orf90Q96M02 699 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 DPH7Q9BTV6 452 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 MRPS30Q9NP92 439 aaKnown RBP14.2□□□□□ -0.14
MSH5-208ENST00000429846 HOMER3Q9NSC5 361 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 SYBUQ9NX95 663 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 C3orf18Q9UK00 162 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 DIDO1Q9BTC0 2240 aaKnown RBP14.2□□□□□ -0.14
MSH5-208ENST00000429846 ZGRF1Q86YA3 2104 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 CENPEQ02224 2701 aa14.2□□□□□ -0.14
MSH5-208ENST00000429846 ITPR2Q14571 2701 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms