RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 STT3AP46977 705 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 NFKB2Q00653 900 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 PIGFQ07326 219 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 SNAP47Q5SQN1 464 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 KLHL36Q8N4N3 616 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 BRSK1Q8TDC3 778 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 BIRC7Q96CA5 298 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 C1orf21Q9H246 121 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 BRD7Q9NPI1 651 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 DMAC2Q9NW81 257 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 FZD4Q9ULV1 537 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 Q9Y3F1 56 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 HTRA2O43464 458 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 BTN3A2P78410 334 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 SLC10A7Q0GE19 358 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 TLR1Q15399 786 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 OR4F3Q6IEY1 312 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 OR2T5Q6IEZ7 315 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 ARL9Q6T311 187 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF782Q6ZMW2 699 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 PIM3Q86V86 326 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 OR2T29Q8NH02 315 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 ZCCHC10Q8TBK6 192 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 TRIB2Q92519 343 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 CRELD1Q96HD1 420 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 SNX27Q96L92 541 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 TMEM59LQ9UK28 342 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 HTR1BP28222 390 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 SP140Q13342 867 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 HEPACAMQ14CZ8 416 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 VARS2Q5ST30 1063 aaKnown RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 RANBP3LQ86VV4 465 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 OR8D1Q8WZ84 308 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF641Q96N77 438 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 PLEKHA1Q9HB21 404 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 ZNF282Q9UDV7 671 aaPredicted RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 MGAT4AQ9UM21 535 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 RUVBL1Q9Y265 456 aaKnown RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 MRPS33Q9Y291 106 aaKnown RBP14.15□□□□□ -0.14
PTPRU-204ENST00000428026 C4BP0C0L5 1744 aa14.15□□□□□ -0.14
PTPRU-204ENST00000428026 FAM159BA6NKW6 160 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 YJEFN3A6XGL0 299 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 H0YGN5 161 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 CLIC1O00299 241 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 ESR1P03372 595 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 CLUP10909 449 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 LILRA4P59901 499 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 USF2Q15853 346 aaPredicted RBP14.15□□□□□ -0.15
PTPRU-204ENST00000428026 LDLRAD1Q5T700 205 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 OGFRL1Q5TC84 451 aaPredicted RBP14.15□□□□□ -0.15
PTPRU-204ENST00000428026 RAB12Q6IQ22 244 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 FOXRED2Q8IWF2 684 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 FBXW11Q9UKB1 542 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 NFS1Q9Y697 457 aa14.15□□□□□ -0.15
PTPRU-204ENST00000428026 TEX46H3BTG2 121 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 ECI2O75521 394 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 CYP3A5P20815 502 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 RPS3P23396 243 aaKnown RBP eCLIP14.14□□□□□ -0.153e-10■■■□□ 16.6
PTPRU-204ENST00000428026 S100A2P29034 98 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 ASPAP45381 313 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 VLDLRP98155 873 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 NPY5RQ15761 445 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 ATXN7L2Q5T6C5 722 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 HMBOX1Q6NT76 420 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 TMC8Q8IU68 726 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 FUZQ9BT04 418 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 C11orf84Q9BUA3 381 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 FAM83DQ9H4H8 585 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 TFB2MQ9H5Q4 396 aaKnown RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 ZBTB26Q9HCK0 441 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 RNF6Q9Y252 685 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 CACNA1FO60840 1977 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 M0QX08 132 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 OR1I1O60431 355 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 BCAS2O75934 225 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 YBEYP58557 167 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 PCBP2Q15366 365 aaKnown RBP eCLIP14.14□□□□□ -0.158e-10■■■■□ 24.4
PTPRU-204ENST00000428026 ZNF598Q86UK7 904 aaKnown RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 ENDOVQ8N8Q3 282 aaKnown RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 ZNF548Q8NEK5 533 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 SETD6Q8TBK2 473 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 CCDC120Q96HB5 630 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 SLC30A2Q9BRI3 323 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 B3GNT4Q9C0J1 378 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 CUEDC1Q9NWM3 386 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 MYBPHLA2RUH7 354 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 H3BSH0 61 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 GRK5P34947 590 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 IGFALSP35858 605 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 PTGER3P43115 390 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 RPL26P61254 145 aaKnown RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 GRSF1Q12849 480 aaKnown RBP eCLIP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 RPA4Q13156 261 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 SLC10A6Q3KNW5 377 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 ZNF773Q6PK81 442 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 QSOX2Q6ZRP7 698 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 C9orf43Q8TAL5 461 aaPredicted RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 GALPQ9UBC7 116 aa14.14□□□□□ -0.15
PTPRU-204ENST00000428026 NARSO43776 548 aaKnown RBP14.14□□□□□ -0.15
PTPRU-204ENST00000428026 ABCB7O75027 752 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms